Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00513 ATGGTGAACCCACGGTGCTTTTTAGACATAAGCATAGGAGGAGAGCTGGAAGGAAGGATATTGGTGGAGCTCTACAGTGATGTGGTTCCCAAAACGGCCGAGAATTTCAGGGCTCTCTGCACTGGAGAGAAGGGCATTGGTCCTAACACTGGTGTTCCTCTCCATTTCAAGGGTGTCTGTTTTCATCGCATTATCAAAGGTTTTATGATACAAAGTGGAGATATCTCTGCTGGGAATGGCACGGGGGGAGAATCCATTTATGGGTTGAAATTTGAAGATGAGAACTTTGATCTGAAACATGAACGGAAAGGAATGTTATCCATGGCCAATTCTGGCCTGAACACCAATGGTTCCCAGTTCTTTATTACTACTACTAGAACTTCTCATCTAGATGGAAAACATGTTGTATTTGGGAAGGTAATTAAAGGCATGGGAGTGGTTCGTTCCATTGAACATGTCTCCACAGGTGATGGTGATTATCCCACTCTTGATGTTGTAATTGCGGATTGTGGAGAAATTCCTGAGGGTACGGATGATGGGACTTCTAATTTCTTTGAAGATGGTGATACTTATCCTGATTGGCCAGCTGACCTTGATGAGAAGCCGAATGAGATCTCTTGGTGGATGAATGCTGTGGATTCTGCGAAAAGTTTTGGAAATGAGCACTACAAGAAGCAAGACTATAAGATGGCTCTTAGAAAGTATCGGAAGGCTTTGCGCTACTTGGATGTCTGCTGGGAGAAAGAAGACATTGATGAAGAAAAGAGTTCATCTTTGAGGAAGGCAAAGTCACAGATATTCACAAATAGTTCGGCTTGTAAATTGAAACTAGGAGATTTAAAAGGAGCATTGTTGGATACAGACTTTGCAATGCGCGATGGAGAGGGTAATGTGAAGGCTTTGTTTCGCCAAGGTCAGGCATACATGGCGCTCAATGATATAGATGCTGCGGTTGAAAGCTTCAAGAAGGCATTAGAGTTGGAGCCAAATGATGGTGGAATAAAAAAGGAGTTCGCCGCTGCAAAGAAGAAGGTTGCTGATAGACGTGATCTGGAGAGAAAGGCGTATTCTAGAATGTTCCAATAG 1086 0.4328 MVNPRCFLDISIGGELEGRILVELYSDVVPKTAENFRALCTGEKGIGPNTGVPLHFKGVCFHRIIKGFMIQSGDISAGNGTGGESIYGLKFEDENFDLKHERKGMLSMANSGLNTNGSQFFITTTRTSHLDGKHVVFGKVIKGMGVVRSIEHVSTGDGDYPTLDVVIADCGEIPEGTDDGTSNFFEDGDTYPDWPADLDEKPNEISWWMNAVDSAKSFGNEHYKKQDYKMALRKYRKALRYLDVCWEKEDIDEEKSSSLRKAKSQIFTNSSACKLKLGDLKGALLDTDFAMRDGEGNVKALFRQGQAYMALNDIDAAVESFKKALELEPNDGGIKKEFAAAKKKVADRRDLERKAYSRMFQ* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00513 361 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 173 - -
Eupl13g00513 361 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 172 IPR002130 GO:0000413|GO:0003755
Eupl13g00513 361 SUPERFAMILY Cyclophilin-like 1 174 IPR029000 -
Eupl13g00513 361 Gene3D Tetratricopeptide repeat domain 212 361 IPR011990 GO:0005515
Eupl13g00513 361 CDD cyclophilin_ABH_like 4 171 - -
Eupl13g00513 361 ProSiteProfiles TPR repeat region circular profile. 298 331 - -
Eupl13g00513 361 ProSiteProfiles TPR repeat profile. 298 331 IPR019734 GO:0005515
Eupl13g00513 361 FunFam peptidyl-prolyl cis-trans isomerase D 210 361 - -
Eupl13g00513 361 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 8 171 IPR002130 GO:0000413|GO:0003755
Eupl13g00513 361 Pfam Tetratricopeptide repeat 298 331 IPR001440 GO:0005515
Eupl13g00513 361 SMART tpr_5 298 331 IPR019734 GO:0005515
Eupl13g00513 361 SMART tpr_5 212 245 IPR019734 GO:0005515
Eupl13g00513 361 FunFam Peptidyl-prolyl cis-trans isomerase D 1 178 - -
Eupl13g00513 361 SUPERFAMILY TPR-like 210 352 IPR011990 GO:0005515
Eupl13g00513 361 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 IPR002130 GO:0000413|GO:0003755
Eupl13g00513 361 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 131 IPR002130 GO:0000413|GO:0003755
Eupl13g00513 361 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 IPR002130 GO:0000413|GO:0003755
Eupl13g00513 361 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 104 119 IPR002130 GO:0000413|GO:0003755
Eupl13g00513 361 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Eupl13g00513 361 Gene3D - 1 179 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00513 Eupl-Chr13 7546598 7559413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00513 17 170 U-box Gene Family AT5G67530 42.581 4.68e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00513 K05864 - nnu:104605465 651.358