Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00507 ATGCTTCCTTTCCCAAGCTACTACGGGTTCGAGAGTTGTTCGAGTCGGGGTGGATTCCTTAATGGACTAGGGACGATGGAGAGGATAGACGGTGGAGGAGGTTCTACTTTCAGCTTAAGATCAATGGCGGAGGAGAAAGCAATCGCGGCATGCAAGAGCCACAGCGAGGCTGAGAGAAGGCGGAGAGAACGAATCAACGGTCACCTGGCTACCCTTCGTACTCTTCTACCGAACAAAACCAAAACGGACAAAGCATCTTTGTTAGCAGAGGTGGTCCAGCACGTGAAGGAGCTGAAGAGGTTAGCTACTGACTTGGCGGATCAGGATGGCGACGGATGCAGCAGGAGTAGAGAATGGCCGTTCCCGGGCGAGTCGGACGAGTTGACGTTGAGTTACTGCGACGCAGAATCGTCGTCGTTGCAATCTTCTTCATTAATTAGGGCGTCGTTGAGTTGCGACGACCGCCCGGACTTGATGTCGGACCTGACGCAAGCGTTGAGATCAGTCCGGGTGAGGATAGTGAAGGCGGAGATCGCGACGGTGGGTGGACGGACGAAAAGCGTGTTAGTGATACAAGGGCGGGGGGAAGGTAGTGGCGACGATGAATTGGGTACGTTAAGGAGAACGTTGAGAGGCGTTATCAATAAGCCTGCGGTGTCTGCATCGGGTCAGGTGTCGTCTGCGAGTAAGCGGCTGCGTCTCTCTCACCAACTCTCATCAGTCATAAGTCATAACCAATGA 741 0.5371 MLPFPSYYGFESCSSRGGFLNGLGTMERIDGGGGSTFSLRSMAEEKAIAACKSHSEAERRRRERINGHLATLRTLLPNKTKTDKASLLAEVVQHVKELKRLATDLADQDGDGCSRSREWPFPGESDELTLSYCDAESSSLQSSSLIRASLSCDDRPDLMSDLTQALRSVRVRIVKAEIATVGGRTKSVLVIQGRGEGSGDDELGTLRRTLRGVINKPAVSASGQVSSASKRLRLSHQLSSVISHNQ* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00507 246 PANTHER TRANSCRIPTION FACTOR BHLH30 39 239 IPR045847 GO:0003700|GO:0006355
Eupl13g00507 246 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 49 98 IPR011598 GO:0046983
Eupl13g00507 246 CDD ACT_UUR-ACR-like 149 214 - -
Eupl13g00507 246 SMART finulus 55 104 IPR011598 GO:0046983
Eupl13g00507 246 Gene3D - 146 227 - -
Eupl13g00507 246 Gene3D - 43 105 IPR036638 GO:0046983
Eupl13g00507 246 SUPERFAMILY ACT-like 146 220 IPR045865 -
Eupl13g00507 246 Pfam Helix-loop-helix DNA-binding domain 51 98 IPR011598 GO:0046983
Eupl13g00507 246 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 53 108 IPR036638 GO:0046983
Eupl13g00507 246 ProSiteProfiles ACT domain profile. 147 227 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00507 Eupl-Chr13 7397944 7399349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00507 40 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 43.602 7.48e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl13g00507 HLH 4.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00507 - - nnu:104595478 281.567