Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00504 ATGAAAGGGGACCAAGTTGTTGAAGACGCAAAGAATACTAACGACATGTTTGCAAAGCACCACCTCGACCACCACCACCTCCACCACCAACAGTTACACCATCAACTGATCAGTCGAGAATGTCAGACATCAGAAGAGGACGAGAGTCGAAGCAGCGGTGGCGGAGTAGGCAAGAAAAGCAGGAAAACCGAAGGTTTCAGCGGTGGTGGAGACGGGGCTACAATTGAAGTAGTGAGGCGGCCAAGAGGCCGTCCACCTGGCTCTAAAAACAAACCCAAGCCCCCCGTCTTCATAACTCGTGACACCGAGTGCGCAATGCGCCCACACGTCCTCGAAGTCCCTGGTGGTCTTGACGTCGTCGACGCCATCGCTCGGTTTGCTTATCGACGTAACGTTGGTCTCTGCGTTCTCACTGGATCCGGCACCGTTGCTAATGTCTCCCTCCGTCAACCCTCCACCACCCCAGGAGCCACAGTGACGTTTCATGGCCGTTTCGATATTCTCTCCATCTCCGCTACTTTTCTTCCTCCTTCATCATCTCTTCCATCTCAGGCCAACGGATTCACGATTTCCCTTGCGGGCCCACAAGGTCAGATCGTTGGTGGGTCTGTTGTTGGTACCTTACTTGCTGCTGGAACTGTCTTCGTTGTTGCCGCCACGTTTACTAGCCCTACATATCACCGATTGCCCATCGAAGACGAAGTTCCCAATTCGGTCCATCCTCCATCTGCTGCCAGTGAAGAAACCCACCCTACACAGGCGGAGTCATGTGGTATGTCCATCTACAGCTGTCACCTTCCTTCGGATGTCATTTGGGCTCCCACCGCCAGACAACCACCACCACCGCCACCGTTCTAA 858 0.5396 MKGDQVVEDAKNTNDMFAKHHLDHHHLHHQQLHHQLISRECQTSEEDESRSSGGGVGKKSRKTEGFSGGGDGATIEVVRRPRGRPPGSKNKPKPPVFITRDTECAMRPHVLEVPGGLDVVDAIARFAYRRNVGLCVLTGSGTVANVSLRQPSTTPGATVTFHGRFDILSISATFLPPSSSLPSQANGFTISLAGPQGQIVGGSVVGTLLAAGTVFVVAATFTSPTYHRLPIEDEVPNSVHPPSAASEETHPTQAESCGMSIYSCHLPSDVIWAPTARQPPPPPPF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00504 285 PIRSF ESCAROLA 10 268 IPR014476 GO:0003680
Eupl13g00504 285 Pfam Plants and Prokaryotes Conserved (PCC) domain 107 222 IPR005175 -
Eupl13g00504 285 CDD DUF296 107 221 IPR005175 -
Eupl13g00504 285 Gene3D - 106 241 - -
Eupl13g00504 285 MobiDBLite consensus disorder prediction 232 252 - -
Eupl13g00504 285 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 44 246 IPR014476 GO:0003680
Eupl13g00504 285 SUPERFAMILY AF0104/ALDC/Ptd012-like 105 233 - -
Eupl13g00504 285 ProSiteProfiles PPC domain profile profile. 103 242 IPR005175 -
Eupl13g00504 285 MobiDBLite consensus disorder prediction 33 57 - -
Eupl13g00504 285 MobiDBLite consensus disorder prediction 24 97 - -
Eupl13g00504 285 FunFam AT-hook motif nuclear-localized protein 107 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00504 Eupl-Chr13 7332582 7334408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00504 71 281 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 60.526 1.49e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00504 - - nnu:104611900 363.999