Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00493 ATGGCCCCCAGTTTCGACAGTGCAGCCTCAAGCCTTCTCTGTGCAGAAGACAACAATAGTCTCATGTGTTTCGATGATTATGGTGCTGTGGATGATGAGTTTGGTGGGGTTGTTTGGCAGCAACAAAGCCATCGAACCCTTAATCAAAACCAAAGCTTTTTTAATGGTGGGGATTTATTCTTGACGGAGTTCCCATTACAGAGTGAGGAGTTTTTGGGTTTGATGGTGAGGAGGGAATGCGAGTACTTGCCAAGAGAAGATTACTTGAAGAGGTTGCATAGTGGGGACTTGGACTTGGGGGTTAGAAGGGAGGCTGTTGATTGGATTAGGAAGGTTCATGCCCATTACAGTTTTGGACCTTTGAGTGCCTATCTATCAATTAATTACTTGGATCGGTTCCTTTCAGCTTATGAACTTCCTAGAGGTAAAGCTTGGATGATGCAGTTGTTAGCTGTAGCTTGTTTATCTCTAGCAGCCAAAGTGGAGGAGACTGATGCGCCTCTGTCTCTAGATTTACAGGTTGGTGAATCCAAATTTGTCTTTGAAGCTAGGACCATACAGAGAATGGAGCTTCTTGTATTGAGCACTTTGAAGTGGAGAATGCAAGCAGTGACACCTTTCTCCTTCATAGATTACTTCCTTTGGAAGATCAACGACGATCAACCTCCACCGAGATTGTTGATCTGTAGATCGATCGAACTCATCTTAAGCACAAATAAAGGGATTGACTTCTTGGAATTCAGGCCTTCTGAGGTTGCTGCAGCAGTGGCAATGTCTGTATCAGGAGAAACCCAAACAGTGGACATTGATAAGGCCGTATCTTGTTTCATTCAACTTGTAGAAAAGGAGAGAATTTTGAAGTGTCTTGAACTGATCCAAGACGCGTTGTTGATTAGTGGGTCTGTTAAGGTTGCAAGTAGTGCCTCAGTTCCATCTGTGCCCCAGAGCCCAATTGGGGTGCTGGATGCTGCATGCTTGAGCTATAAAAGTGATGAATTAACAGTTGGGTCATGTGCAAATTCTTCTCATTCAAGTCCAGAAGCTAAGAGGAGGAAACTAGACAGACCATCTGAAGTGAACTTCAAGTCATGA 1092 0.4396 MAPSFDSAASSLLCAEDNNSLMCFDDYGAVDDEFGGVVWQQQSHRTLNQNQSFFNGGDLFLTEFPLQSEEFLGLMVRRECEYLPREDYLKRLHSGDLDLGVRREAVDWIRKVHAHYSFGPLSAYLSINYLDRFLSAYELPRGKAWMMQLLAVACLSLAAKVEETDAPLSLDLQVGESKFVFEARTIQRMELLVLSTLKWRMQAVTPFSFIDYFLWKINDDQPPPRLLICRSIELILSTNKGIDFLEFRPSEVAAAVAMSVSGETQTVDIDKAVSCFIQLVEKERILKCLELIQDALLISGSVKVASSASVPSVPQSPIGVLDAACLSYKSDELTVGSCANSSHSSPEAKRRKLDRPSEVNFKS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00493 363 FunFam D6-type cyclin 198 290 - -
Eupl13g00493 363 CDD CYCLIN_AtCycD-like_rpt1 101 199 - -
Eupl13g00493 363 PANTHER CYCLINS 73 293 IPR039361 -
Eupl13g00493 363 SMART Cyclin_C_2 204 329 IPR004367 -
Eupl13g00493 363 Pfam Cyclin, C-terminal domain 204 297 IPR004367 -
Eupl13g00493 363 SMART cyclin_7 107 195 IPR013763 -
Eupl13g00493 363 CDD CYCLIN_AtCycD-like_rpt2 204 292 - -
Eupl13g00493 363 Pfam Cyclin, N-terminal domain 74 201 IPR006671 -
Eupl13g00493 363 FunFam D2/4-type cyclin 85 197 - -
Eupl13g00493 363 Gene3D - 75 290 - -
Eupl13g00493 363 ProSitePatterns Cyclins signature. 102 133 IPR006671 -
Eupl13g00493 363 MobiDBLite consensus disorder prediction 337 363 - -
Eupl13g00493 363 Gene3D - 85 202 - -
Eupl13g00493 363 SUPERFAMILY Cyclin-like 65 201 IPR036915 -
Eupl13g00493 363 MobiDBLite consensus disorder prediction 345 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00493 Eupl-Chr13 7064520 7066520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00493 43 339 Core Cell Cycle Gene Families AT2G22490 50.809 1.73e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00493 K18810 - nnu:104608606 514.227