Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00481 ATGAAGTGCCCAAGATGTGATTCTCCCAACACCAAATTCTGTTACTACAACAATTACAGTCTCACACAGCCAAGACACTTCTGCAAGACATGTAGAAGGTATTGGACTAAAGGAGGAGCTTTACGCAACGTTCCCATAGGTGGTGGTTGTCGGAAAAATAAGAAGACTAAGTCAGGTTCTAGACTCTCCAGTGATTCTAAGGAAAGTTCTACATCGTCGGAGACTGGTGGATTGAAGTTCTTTCATGGAATCTCACCAGCCATGGAGTTTCAGCTTGGTGGGCTCCCTTTCTCGAGGTTGCATTCTTCAACAACTGGTGTTTATAACCAGTTTGTTTCATATGGGGACATCTCTTCTTCTACTACTGCTACTAATCCTTCTTGTTTCGATATGGATCCGTCAGCTACCTCTGGTTCTTTGATGGGTTTTAATTATCCGTCAGTCTTCACAACTCTCACTGTCTCTCACTATCTCTCTCTGAGAGTCTCAGGAACTTCTGCTACTGAACACATATATTAA 519 0.4277 MKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKTKSGSRLSSDSKESSTSSETGGLKFFHGISPAMEFQLGGLPFSRLHSSTTGVYNQFVSYGDISSSTTATNPSCFDMDPSATSGSLMGFNYPSVFTTLTVSHYLSLRVSGTSATEHIY* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00481 172 ProSitePatterns Zinc finger Dof-type signature. 3 39 IPR003851 GO:0003677|GO:0006355
Eupl13g00481 172 ProSiteProfiles Zinc finger Dof-type profile. 1 55 IPR003851 GO:0003677|GO:0006355
Eupl13g00481 172 MobiDBLite consensus disorder prediction 51 75 - -
Eupl13g00481 172 Pfam Dof domain, zinc finger 2 55 IPR003851 GO:0003677|GO:0006355
Eupl13g00481 172 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 2 101 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00481 Eupl-Chr13 6756784 6758337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00481 1 155 C2C2-Dof Transcription Factor Family AT5G65590 45.509 4.52e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Eupl13g00481 zf-Dof 3.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00481 - - vri:117917796 235.343