Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00467 ATGACCTCTGCAGAAGAAACTGGAGAAACCCATGAAAACCCAGAAACAGAATCTGAAAATGGTTTCAGAAAACCAGATTTTAATGAGGAAAACAGTTCTCCAAGGGGTGTACTGGAAATCCCTGTTCTGGGTGCCGATTTAGATAACAGTAGTAGCAGCTTCAGTTCTTCTTCTACGGAAAAATCTATTAGTCACCAAGCTTTGATTCCGGAGTCTCATGGGTTACAGTGGAGGAATTTGTTTGAGGTTATAAAGAAGAAATCTTTGAGAAGGTTCTATACGCTTCCGAGGTTGACGAGCTCGGAGATCTCGAAAAGGAATTTAAACAGGAAGTTGGCTCGAATTCGCAGTGCCGAAGATCGAATTGAGTATGGGGATGGAGGACCTTCGGTGGCGAAACCTTCCTGGAGGAGCTTTGATTATGAGGAGCTCGCCGCTGCAACTGATAATTTCAGTTCTGAGAAGCTGATTGGGAAAGGAGGGCACGCAGAAGTGTATAAAGGGTGCCTCTCGGATGGTCAGCTTGTGGCAGTAAAGAGGCTAACGAAGAAACGGAACGAAGAAGAGGAAAGAACCAGTGATTTCTTATCTGAGCTCGGAATAATCGCCCATATTAATCACCCAAATGCTGCTCGTTTGCTTGGATTTAGTGTAGAAGGGGGTTTGCACCTCATCCTCCAGTTCTCCCACCATGGCAGCCTCGCTTCTTTGCTTCATGGTTCAAAGGAGAGTCTTGAATGGGGAATAAGGTTTAGAGTGGCTAAAGGAGTGGCTGAAGGATTACAGTATCTCCATCAGGGGTGTCACAGACGTATAATCCATAGAGACATCAAAGCCTCTAACATTTTACTAAACCAAGATTATGAACCTCAGATTTCTGATTTCGGACTCGCAAAATGGCTTCCAGACCAATGGACTCACCACATAGTCTTTCCCATAGAGGGCACATTTGGATATTTAGCGCCGGAATACTTCATGCATGGGATAGTCGATGAGAAAACCGATGTCTTTGCCTTTGGGGTGTTACTATTGGAGCTCATAACAGGTCGTCACGCTGTTGACTCTAGTCGCCAAAGCCTCGTGATGTGGGCAAAGCCACTATTGGACACCAATGATATGAAAGAATTAGTCGATCCTCGTCTAGGAGATGGTTACAACATCGGCGAGATGAAACGGGCAATGTCGACAGCTTCAATGTGCATTCATCACTTGTCGAACATGCGGCCGTACATGAGTCGGGTTGTACAGCTTTTGAGGGGTGAGGATGGATCAGTAGAGGTGATAGGAAGAGAAAAAAGGGATGTTGTAGGAAGGGCTGTTCTTTTGGATGCTTGTGACTTGGAAGATTACACTTGTTCCACCTACCTCAATGATCTTAATCGCCATAGGCAACTTGCTTTAGAATAG 1407 0.452 MTSAEETGETHENPETESENGFRKPDFNEENSSPRGVLEIPVLGADLDNSSSSFSSSSTEKSISHQALIPESHGLQWRNLFEVIKKKSLRRFYTLPRLTSSEISKRNLNRKLARIRSAEDRIEYGDGGPSVAKPSWRSFDYEELAAATDNFSSEKLIGKGGHAEVYKGCLSDGQLVAVKRLTKKRNEEEERTSDFLSELGIIAHINHPNAARLLGFSVEGGLHLILQFSHHGSLASLLHGSKESLEWGIRFRVAKGVAEGLQYLHQGCHRRIIHRDIKASNILLNQDYEPQISDFGLAKWLPDQWTHHIVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRHAVDSSRQSLVMWAKPLLDTNDMKELVDPRLGDGYNIGEMKRAMSTASMCIHHLSNMRPYMSRVVQLLRGEDGSVEVIGREKRDVVGRAVLLDACDLEDYTCSTYLNDLNRHRQLALE* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00467 468 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 129 228 - -
Eupl13g00467 468 SMART serkin_6 151 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00467 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Eupl13g00467 468 ProSitePatterns Protein kinases ATP-binding region signature. 157 179 IPR017441 GO:0005524
Eupl13g00467 468 Gene3D Phosphorylase Kinase; domain 1 126 228 - -
Eupl13g00467 468 MobiDBLite consensus disorder prediction 8 30 - -
Eupl13g00467 468 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 230 432 - -
Eupl13g00467 468 Gene3D Transferase(Phosphotransferase) domain 1 230 433 - -
Eupl13g00467 468 ProSiteProfiles Protein kinase domain profile. 151 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00467 468 SUPERFAMILY Protein kinase-like (PK-like) 131 418 IPR011009 -
Eupl13g00467 468 Pfam Protein kinase domain 152 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00467 468 PANTHER OS08G0249100 PROTEIN 28 432 IPR046958 -
Eupl13g00467 468 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00467 Eupl-Chr13 6479213 6486319 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00467 139 414 Trihelix Transcription Factor Family AT1G68690 45.614 1.22e-72 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Eupl13g00467 Pkinase 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00467 - - ming:122072985 706.057