Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00466 ATGCCTCATCGACGGACTTACTTCTTTCCGAGGCAATTTCCAGATCATGGATTCGATCCTTCGTCAAAAGACTCAAAACTGATCCTGGTTCACGAGAAGAAGACCGCGAAAGAGAGCATTAATGCCGAAAAAGACCGGAAAGCGACGAAGAACACGAAGCAGACCACAGTTGAGAAGAATCTAACAGCATCTGATCTTTTCACGGGTGATAAATATCAAATTGGAAAGCAAGTTGCCGCTCTCAGCGGTTGGTTGGTGGATAGAAAGGCCAACCGTTCCGTTCACCTGCACTCGAGATCGGGCGATGAGGATCGACAGCTTTTGCTCGAACCGGAGCGGGGACCGGAAATGATCGTTAGTCAAGATCAGAATTTTGGTCGCCAGGCTTCGTCGCAGAGGCTGTCGAGTGGAAGTAGTTACGCCGGAAGCCTGTTCTCGGGGACAACGGAGGACGGGAATGTTTCGAGCGACGCTAAGGATTCGCAACTTTCGAACAGGCAAGAGGACGAAGAGAGCGGGGAGAATTTGGCACAGAGATCGCGCGAGAGTTACTATCTGCAGCTTACGCTCGCGGTTCGGCTCGCATCTCAAGCATCTCTGGCTGATGAACCTTCTCTTCTGCAAGAGACTGCGCCGGACACCCGTGCTGTTTCTTGTGATGCGGAAAGGGTTTCTTATCGTCTCTGGGTCAGTGGATGCTTATCGTATTCTGACAAGATATCAGATGGGTTTTATAACATTCTGGGGATGAATCCGTATTTGTGGGTGATGTGCAACCAGCTGGAGGAAGGGAGACGGCTGCCACCTTTAGTGTCCCTTAGAGCTGTGGATCCTAGCGATACCTCCATGGAAGTGGTGCTTGTTGATAGACATGGGGATTTACGCCTTAAGGAGCTTGAAGACAAAGCACGAGAACTTTATTATGCTTCAGGAAATACCTTGGTGTTGGTGGAGAAGCTTGGCAAACTTGTTTCTATCTTTATGGGGGGTGCGTTTCCGGTAGAGGAAGGTGATCTCCACATGCACTGGAAATTGGTTAGCAAAAGATTGAGAGATTGTCGACAATGCATTGTGCTCCCCATTGGCAGCCTATCTATGGGACTCTGTAGGCATCGAGCCATTCTTTTCAAGAAATTGGCTGATTGCATAGGTTTACCATGCCGGATAGCTCGAGGTTGCAAATATTGTGCGGCAGACCATCGGTCTTCTTGTCTTGTCAAAATTGGAGACAGGCAGTCATCAAGGGAATATGTAGTTGATCTAGTTGGGGAACCAGGAAATGTCCATGGTCCAGATTCCTCAATCAATGGAGCTTTACTTTCATCGATGCCTTCACCATTCCAAATTTCTCCTCTAAAAGGTTTCCAACAACCTTACATGGATAGTACATCATTTAGTCAGTCACTGAACCCAGAGCGCACTTGTGCTTTTCCTGAGCATCCTCAAAGTTCAGCAAATAAAAACTATAGAGGTTGTCGCCCATGCCTGGGAAAAGAAGTCCAGTCAATGCATGATCATGATTTGCTTAAAAACAAAAAGGCTTCCATTTACTTCTCGATCGATAAGGCTTGTGGAATATTGGAATCATCAGTGATGCCGCTGGACTCTGAAGATTATACCGGCGTTCGTATTCCAAGTGTGCCATTGCCTTCTGTCCAGGACAATCTGGAATCTGTTGCAGGTATATCTATACATGGACATTGCAGACTTCACGGAGACAAATATCTCATTCAAGAATCTTACAAAGAAGGGTTAGTGGCAACCGGAAGTTCAAATGTGAACATCAAACAACCTAAAGCAGAATTATCTTGTCAACTGGAGATGAAGGAGGTTGAAAATGGAGGCAGTTTTCCAATCGTCACTAACCCAAGCTATTTGAATCTTGAGCCTTCTCTTGCAATCGATTGGCTTGAGATCTCATGGGATGAATTACACATCAAGGAGCGCATTGGTGCTGGTTCATTTGGGACAGTGTACCGTGCTGAATGGAACGGATCGGATGTTGCAGTCAAGGTTCTAGCTATTCAGGATTTTCGTGATGATCAACTGAAGGAGTTTCTGAGAGAGGTTGCAATAATGAAACGTGTACGCCATCCAAATGTTGTTCTCTTCATGGGTGCAGTTACTAAGCGTCCACATCTGTCAATAGTGACAGAATATTTGCCTAGGGGTAGCCTTTACCGTCTTATAAATAGAGCAGCTGCTGGTGAAATCTTGGATAAAAGGAGGCGAATACGCATGGCATTAGATGTGGCCAAAGGGATCAATTATCTCCATTGCCTAAGTCCTCCTATAGTTCACTGGGATCTTAAATCTCCAAATTTGTTGGTAGACAAGAATTGGACAATGAAGGTATGTGACTTTGGCTTATCCAGATTCAAGGCAAACACCTTTATATCGTCAAAATCTGTTGCTGGCACGCCTGAGTGGATGGCTCCAGAATTCCTTCGTGGAGAACCCTCGAATGAAAAGTCTGATGTTTACAGCTTCGGAGTGATCTTATGGGAGCTTGTGACTATGCAACAACCATGGAGTGGACTCAGCCCGGCCCAGGTGGTTGGAGCTGTTGCCTTCCAGAACAGACGGCTTGTTATCCCACAGAATACCTGCCCTATGTTGGCATCTCTGATGGAGTCGTGCTGGGCAGATGATCCTAAGCAGCGGCCATCATTTGCGAGTATTGTGGATTCACTAAAAAAGTTGCTGAAGTCTCCGATGCAGTTAGTACAGATGGGGGACCCATGA 2745 0.4641 MPHRRTYFFPRQFPDHGFDPSSKDSKLILVHEKKTAKESINAEKDRKATKNTKQTTVEKNLTASDLFTGDKYQIGKQVAALSGWLVDRKANRSVHLHSRSGDEDRQLLLEPERGPEMIVSQDQNFGRQASSQRLSSGSSYAGSLFSGTTEDGNVSSDAKDSQLSNRQEDEESGENLAQRSRESYYLQLTLAVRLASQASLADEPSLLQETAPDTRAVSCDAERVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNQLEEGRRLPPLVSLRAVDPSDTSMEVVLVDRHGDLRLKELEDKARELYYASGNTLVLVEKLGKLVSIFMGGAFPVEEGDLHMHWKLVSKRLRDCRQCIVLPIGSLSMGLCRHRAILFKKLADCIGLPCRIARGCKYCAADHRSSCLVKIGDRQSSREYVVDLVGEPGNVHGPDSSINGALLSSMPSPFQISPLKGFQQPYMDSTSFSQSLNPERTCAFPEHPQSSANKNYRGCRPCLGKEVQSMHDHDLLKNKKASIYFSIDKACGILESSVMPLDSEDYTGVRIPSVPLPSVQDNLESVAGISIHGHCRLHGDKYLIQESYKEGLVATGSSNVNIKQPKAELSCQLEMKEVENGGSFPIVTNPSYLNLEPSLAIDWLEISWDELHIKERIGAGSFGTVYRAEWNGSDVAVKVLAIQDFRDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLINRAAAGEILDKRRRIRMALDVAKGINYLHCLSPPIVHWDLKSPNLLVDKNWTMKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLSPAQVVGAVAFQNRRLVIPQNTCPMLASLMESCWADDPKQRPSFASIVDSLKKLLKSPMQLVQMGDP* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00466 914 Gene3D Phosphorylase Kinase; domain 1 637 721 - -
Eupl13g00466 914 SMART serkin_6 644 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00466 914 MobiDBLite consensus disorder prediction 36 53 - -
Eupl13g00466 914 Pfam Ethylene-responsive protein kinase Le-CTR1 221 428 - -
Eupl13g00466 914 Pfam Protein tyrosine and serine/threonine kinase 644 898 IPR001245 GO:0004672|GO:0006468
Eupl13g00466 914 ProSiteProfiles Protein kinase domain profile. 644 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00466 914 PRINTS Tyrosine kinase catalytic domain signature 869 891 IPR001245 GO:0004672|GO:0006468
Eupl13g00466 914 PRINTS Tyrosine kinase catalytic domain signature 825 847 IPR001245 GO:0004672|GO:0006468
Eupl13g00466 914 PRINTS Tyrosine kinase catalytic domain signature 759 777 IPR001245 GO:0004672|GO:0006468
Eupl13g00466 914 PRINTS Tyrosine kinase catalytic domain signature 718 731 IPR001245 GO:0004672|GO:0006468
Eupl13g00466 914 Gene3D Transferase(Phosphotransferase) domain 1 723 910 - -
Eupl13g00466 914 SUPERFAMILY Protein kinase-like (PK-like) 621 897 IPR011009 -
Eupl13g00466 914 FunFam Serine/threonine-protein kinase isoform 1 634 722 - -
Eupl13g00466 914 MobiDBLite consensus disorder prediction 162 177 - -
Eupl13g00466 914 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 179 904 - -
Eupl13g00466 914 MobiDBLite consensus disorder prediction 119 178 - -
Eupl13g00466 914 ProSitePatterns Protein kinases ATP-binding region signature. 650 671 IPR017441 GO:0005524
Eupl13g00466 914 FunFam Serine/threonine-protein kinase CTR1 723 908 - -
Eupl13g00466 914 MobiDBLite consensus disorder prediction 121 161 - -
Eupl13g00466 914 CDD STKc_MAP3K-like 650 898 - -
Eupl13g00466 914 MobiDBLite consensus disorder prediction 36 55 - -
Eupl13g00466 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 765 777 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00466 Eupl-Chr13 6436258 6466102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00466 1 912 MAP Kinase Kinase Kinase AT4G24480 54.803 0.0 1005
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Eupl13g00466 PK_Tyr_Ser-Thr 9.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00466 - - nnu:104595512 1273.46