Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00465 ATGATGCCAGCGAGTAACTGGCTTTCTTTTTCTCTCTCTCCATTGGAGATGTTGCGATCGAGCCAGTCTCAGATTTTACAGACGAAGCTATCGCCCTACGAAAGCCCTTCTTATTCTTCTCAGCGATCTATCTTCGACACCTACGGCAACGACTGGTCGAATATTAGAGCTGAAATCCCATACACAGAAGAAAGTAGAGAAGTAAGAGAAATCAAAGCAGCGAGCAGCATTGCCGACTTGTCGATTCTCTCGGCCTTCAATCCTCAAATACAACAAACAGCACCGAAGCTCGAGGATTTCTTCGGCGGCCAATCTTCGTCCCAGCTGCATCAATATCCACACAGCCAAACAGAAACCCAAGAATCCTCCCTAAGCAATGTTTATGAACAGGGTTCGAGTCACATGGACGACCAACAAGATCTGAAAACAATCACAGCGTCAGCTGGATATCAAGCATTCTCCACCAACTCGGGTTCGGAGGTGGACGATTCGGTGTCAGTAGCCGGAACTCGGTTCTCATGTGGCAATTATCAGGGCCACCCACTCGAATCAGGAAACAGCGGTAGAAGTCAAGGATTAACTTTGGGTGGGCCCGGTGGGATCAATCAGAGCTCGGAAAAGGCTATCGTTTCGGTTGATTCGGAATCATCGACAAAGAAGATTCCCACCGATACATTTGGTCAGAGAACTTCTGTTTACAGAGGGGTTACAAGGCACAGGTGGACGGGAAGATACGAAGCGCATCTGTGGGATAACAGCTGTAGGAGAGAAGGGCAAAGCAGGAAAGGACGTCAAGGTGGGTACGACAAGGAGGAGAAAGCAGCAAGGGCTTATGATCTTGCGGCTCTAAAATACTGGGGTCCCACTGCTACTACTAACTTCCTGTCTTTGGAGTGCATGACATGGTTTCCTTGGGTGCATTCCCATAAATCAACGGAAGAGGAAGCAGCTGAAGCGTATGACATAGCAGCGATAAAGTTCAGGGGGTTGAACGCTGTAACCAACTTCGAGATGAGCCGATACAACGTTGAAGCCATCGCAAACAGTGCCCTTCCCATCGGTAGTGCGGCCAAGCGCCTTAAGCTCTCTCTTGAAGCTGAGCCTGAATCATCCTTGTATGATGACCAACAGCTTCGAAGCACTAGTAGCAGTACCAGCATTGCTACTGTCCCCACCGTCTCATGTGCAGTCCCATTTGACACAGCACCACCTCTATATCATCACAACCTTTTCCAGCACATTCACTCTGCCAATGGTGGCTCTTCCGACTCGTCTGGTTCATCCTCCGGGGTCTCTCCCATGTCACTATTGCCGACAGCGGATTTTTGCAACCGGAGTTTCTTGTATGGTGTCACAACTCCTATTAACATCAGCAGCCACTTTAACGGCCACATCAACATCAACACAGCTAACATGAACCACCAGGGCTGGAATGTGGCGCCCTACTCTTAA 1452 0.4917 MMPASNWLSFSLSPLEMLRSSQSQILQTKLSPYESPSYSSQRSIFDTYGNDWSNIRAEIPYTEESREVREIKAASSIADLSILSAFNPQIQQTAPKLEDFFGGQSSSQLHQYPHSQTETQESSLSNVYEQGSSHMDDQQDLKTITASAGYQAFSTNSGSEVDDSVSVAGTRFSCGNYQGHPLESGNSGRSQGLTLGGPGGINQSSEKAIVSVDSESSTKKIPTDTFGQRTSVYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGPTATTNFLSLECMTWFPWVHSHKSTEEEAAEAYDIAAIKFRGLNAVTNFEMSRYNVEAIANSALPIGSAAKRLKLSLEAEPESSLYDDQQLRSTSSSTSIATVPTVSCAVPFDTAPPLYHHNLFQHIHSANGGSSDSSGSSSGVSPMSLLPTADFCNRSFLYGVTTPINISSHFNGHININTANMNHQGWNVAPYS* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00465 483 CDD AP2 231 294 IPR001471 GO:0003700|GO:0006355
Eupl13g00465 483 Pfam AP2 domain 231 287 IPR001471 GO:0003700|GO:0006355
Eupl13g00465 483 SUPERFAMILY DNA-binding domain 231 295 IPR016177 GO:0003677
Eupl13g00465 483 Gene3D AP2/ERF domain 232 296 IPR036955 GO:0003700|GO:0006355
Eupl13g00465 483 Gene3D AP2/ERF domain 305 339 IPR036955 GO:0003700|GO:0006355
Eupl13g00465 483 ProSiteProfiles AP2/ERF domain profile. 232 295 IPR001471 GO:0003700|GO:0006355
Eupl13g00465 483 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 311 416 - -
Eupl13g00465 483 FunFam AP2-like ethylene-responsive transcription factor ANT 231 297 - -
Eupl13g00465 483 MobiDBLite consensus disorder prediction 182 202 - -
Eupl13g00465 483 SUPERFAMILY DNA-binding domain 311 339 IPR016177 GO:0003677
Eupl13g00465 483 PRINTS Ethylene responsive element binding protein signature 233 244 IPR001471 GO:0003700|GO:0006355
Eupl13g00465 483 PRINTS Ethylene responsive element binding protein signature 319 339 IPR001471 GO:0003700|GO:0006355
Eupl13g00465 483 MobiDBLite consensus disorder prediction 100 136 - -
Eupl13g00465 483 SMART rav1_2 304 343 IPR001471 GO:0003700|GO:0006355
Eupl13g00465 483 SMART rav1_2 232 301 IPR001471 GO:0003700|GO:0006355
Eupl13g00465 483 ProSiteProfiles AP2/ERF domain profile. 311 337 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00465 Eupl-Chr13 6415020 6420463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00465 226 370 AP2-EREBP Transcription Factor Family AT5G10510 48.276 7.47e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl13g00465 AP2 4.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00465 K09285 - qsa:O6P43_033249 418.313