Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00456 ATGATTGAGACCAATAAGAAGAAGAAGGGCTCAATCAGTGAAGAAGATATCTCCTATGTTTTACGAAGGTATACCGCTCCGACGATACTAGCTTTGCTACGGGAAGTTTCTCAATTTCCCGAATGGAAGATCGATTGGAATACACTGGTGAAGAAGACCTCAACGGGAATTTCTAATGCCCGGGAATATCAGATGCTATGGCGACATTTAGCCTACCGCGACGCATTGTTAGAACAAGTAGAAGATGGGGCCGAACCTTTGGATGATGATAGTGATTTAGAATATGAGTTGGAAGCATTTCCTTCTGTTAGTGGCGAATCCTCAATGGAGGCTGCAGCATGTGTGAAGGTGATGCTTGCTTCTGGTTTGCCAAGTGGCTCTGGTCCCCGGAACCGCTCAACCGTTGAGGCTCCATTGACTATAAATATACCCAATGGTCAGTCATCCCAGGCTCCATCAGAGAATCCGCAGCTAGCCTGTATACAAGGGACAAACATTACTGTTCCAGTTTCTGTGCAGAATACAATGACAGCTGCAGAAGGATTGGATGGAAACGGATCAGCTAGTGGTGGCCTGCCAGCCCGAAGGAAAAGGAAACTATGGACAGCAGAGGAGGATATGGAACTGATTGCTGCTGTACAGAAATGTGGCGAAAGGAATTGGGCAAACATTCTAAAAGGGGACTTCAAGGGGGATAGAACTGCTTCACAATTATCTCAGAGGTGGGCCATCATAAGGAAGCGCCAGGCTAACTTGAATCCAGGTGGAGCTGGTAACTCAACAGGTTCACAACTTTCTGAGGCACAGCTTGCGGCTCGTCGGGCAGTTTCTCTAGCTCTTAATATGCCTATGATGGATAGGTTATCGGCAGCATGTTCTGTCGGTGTGACACATTCAAGCACTCCATCCAGTTCCTCTGCAGTTCCTGCTGAAGCTTCACCGGTTTCTGGTACTCCCTTGGGAGCAAGCACAAAACCTGTAGTTGGCAGCAGTATTTCACAGGAACCACATCAGACTCAGCAAGCGCCCCAACAGACGGCTGCATCATCTCAAAGAGGAACATCAAGTACCACCCCAAAATCTCGAGTAACAACCAAAAAAACATCGTCAGTTCCAGTTAAGTTATCTGTGGGCCCAAATCCCATGATACAAGCTGCAGCAGTGGCTGCCGGGGCCCGCATTGCCCCTCCTTCAACTGCCGCGTCACTGCTCAAAGCCGCACAGTCTAAAAACGCTGTCCATATCAGACCTGGAGGGGGCTCTGTGATTAAAACATCAATGCCAGGTGGTACAAAATCATTGGCCTCTAACAACTCAGGCTCTCGTCCTAATGTACACTACATTCGGACTGGTCTGGTATCAGCATCACCACCTCCACCCACCTATTCTGGTGTGACGCCGAGTATCCAGCGGACTGGCAGCAGTCAGCAAACATATGGAAACTCTGCAAGGCCAGCTGCAGCAGCAGATCAACTTCCTTCTGTCGGCACTACCACATCATTGAATTTTTCCGAACAGGCAATGTCGGCATCTTCCTTGTGTGCCACTTCATGTGGGACTGCCGAAGGTAAGAACACTAATGCTATCTCTACTGTGGCTGTTGGACTCTCATCTAAGGAAGAAGTTAAATCCTCCGAAGAGATGAAAGTAGATGACTCCGGGAGTGTGCCTAAGGAACGTGGCCAAGATGACCAGGCGGCTTTACAAAATTCAGAGGTGGTTAGTGAAAATCTGACAACCATGGTTGAGAATTTGAGACATTCACGGGACGTGGAGGCAGGTGAGAATAATCAAACTTCTTCTGTTAAAAACGAGACTGTTGAGAGCCAAAATGCGAGTGAAAAGATGGTGTGTTCACCACTGACAGAGGATGAGGATCAATCCATTGTTAATAAGACAGGTGAGAATCAATCTGTGATTGATAAATGA 1929 0.4769 MIETNKKKKGSISEEDISYVLRRYTAPTILALLREVSQFPEWKIDWNTLVKKTSTGISNAREYQMLWRHLAYRDALLEQVEDGAEPLDDDSDLEYELEAFPSVSGESSMEAAACVKVMLASGLPSGSGPRNRSTVEAPLTINIPNGQSSQAPSENPQLACIQGTNITVPVSVQNTMTAAEGLDGNGSASGGLPARRKRKLWTAEEDMELIAAVQKCGERNWANILKGDFKGDRTASQLSQRWAIIRKRQANLNPGGAGNSTGSQLSEAQLAARRAVSLALNMPMMDRLSAACSVGVTHSSTPSSSSAVPAEASPVSGTPLGASTKPVVGSSISQEPHQTQQAPQQTAASSQRGTSSTTPKSRVTTKKTSSVPVKLSVGPNPMIQAAAVAAGARIAPPSTAASLLKAAQSKNAVHIRPGGGSVIKTSMPGGTKSLASNNSGSRPNVHYIRTGLVSASPPPPTYSGVTPSIQRTGSSQQTYGNSARPAAAADQLPSVGTTTSLNFSEQAMSASSLCATSCGTAEGKNTNAISTVAVGLSSKEEVKSSEEMKVDDSGSVPKERGQDDQAALQNSEVVSENLTTMVENLRHSRDVEAGENNQTSSVKNETVESQNASEKMVCSPLTEDEDQSIVNKTGENQSVIDK* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00456 642 MobiDBLite consensus disorder prediction 540 559 - -
Eupl13g00456 642 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 632 - -
Eupl13g00456 642 ProSiteProfiles Myb-like domain profile. 193 242 IPR001005 -
Eupl13g00456 642 MobiDBLite consensus disorder prediction 537 571 - -
Eupl13g00456 642 Gene3D - 193 252 - -
Eupl13g00456 642 MobiDBLite consensus disorder prediction 594 617 - -
Eupl13g00456 642 Pfam Myb-like DNA-binding domain 198 242 IPR001005 -
Eupl13g00456 642 CDD SANT_TRF 201 247 - -
Eupl13g00456 642 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 250 IPR017930 -
Eupl13g00456 642 MobiDBLite consensus disorder prediction 585 642 - -
Eupl13g00456 642 SUPERFAMILY Homeodomain-like 195 247 IPR009057 -
Eupl13g00456 642 MobiDBLite consensus disorder prediction 470 492 - -
Eupl13g00456 642 MobiDBLite consensus disorder prediction 624 642 - -
Eupl13g00456 642 SMART sant 197 248 IPR001005 -
Eupl13g00456 642 MobiDBLite consensus disorder prediction 470 484 - -
Eupl13g00456 642 MobiDBLite consensus disorder prediction 295 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00456 Eupl-Chr13 6266906 6279880 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl13g00456 Myb_DNA-binding 5.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00456 - - nnu:104611924 709.138