Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00446 ATGATGGCTGTTGCTGGTTCTTTGCAATTGTCCCATGAATTGGGAATTTGCAAGAACCAAGGATGCACTAACCAATTTAAGAGTGTGGTGAGAAGTGGCCGGATACATTTATTGAATGTCGCCATTTCATCACATTCTTCGCGACTGGATGCTTTGAGTCTCCATCTTTCAGACAGTGTACACAGGCCAATACGTTATGTACCTTCCAGATGTAATGTATTCATGTGCCGATCTTTTCTTGTCCCAGGTCGAGCAAATGAGATTCCCATTCTGAAAACTGCTGCCACAGCTTTGATGAGGTCATATAATTCTTTTTATGGAAGTCCTATTGTACTTCAGTTGATCCCAGCAGTTGGTATTATTGCTTTTGCTGTGTGGGGTCTTGCGCCACTCATGCGTCACAGCAGGAACCTTTTTCTCCATCGGAGTGATAGTAGTTGGAAAAAGAGTAGTACGCGTTATGTTGTGACCTCTTATCTTCAACCTTTGCTGCTGTGGGCTGGAGCAACACTCGTCTGCAGGGCGCTGGATCCAGTAGTTCTAACTTCAGAAGCTAGCCAGGATGTTAAGCGACGTCTTTTGGTCTTTGTAAGATCATTATCGACTGTGCTGGCTTTCACCTATTGTCTATCAAGCTTAATTCAACAAGCACAAAAATTCTTTATGGAGACGAATGACTCCAATGATACAAGAAATATGGGTTTTCAGTTCGCTGGGAAGGCTGTATACACTGCAGTATGGGTTGCCGCTGTTTCATTGTTCATGGAGTTGCTGGGTTTCTCTACCCAGAAATGGCTTACTGCTGGAGGTCTTGGAACAGTATTGCTGACCCTTGCCGGTCGTGAGATATTCACAAACTTCCTCTCAAGTGCAATGATCCATGCAACACGGCCATTCATTGTGAATGAATGGATTCAAACGAAGATTGAGGGCTATGAAGTTTCTGGTACTGTTGAGCATGTGGGTTGGTGGTCACCAACAATAATAAGAGGGGAAGACCGTGAAGCAGTTCACATTCCAAACCACAAGTTCACAGTGACTGTTGTGAGGAATCTCAGTCAGAAGACCCATTGGCGTATCAAAACCCACCTTGCCATCAGTCACTTGGATGTCCATAAGATTAATAATATTGTGGCAGATATGCGCAAAGTCTTGGCAAAAAATCCTCAAGTGGAGCAGCAGAGGTTGCATAGAAGAGTATTTTTGGACAATATTGATCCAGAAAATCAGGCTCTTTTGATTCTGATATCCTGCTTTGTGAAGACCTCACATTTTGAAGAGTACCTTTGTGTGAAGGTAAGAGGATTTAATTTATTATTCAAGGTTCAACTTCGATTAATAAAGAAAATGATGTGTTTGGATATCATTGCATTGATTCTTCATATATGTATCATACCGATGTTTGATTTACTATTTTAA 1419 0.4193 MMAVAGSLQLSHELGICKNQGCTNQFKSVVRSGRIHLLNVAISSHSSRLDALSLHLSDSVHRPIRYVPSRCNVFMCRSFLVPGRANEIPILKTAATALMRSYNSFYGSPIVLQLIPAVGIIAFAVWGLAPLMRHSRNLFLHRSDSSWKKSSTRYVVTSYLQPLLLWAGATLVCRALDPVVLTSEASQDVKRRLLVFVRSLSTVLAFTYCLSSLIQQAQKFFMETNDSNDTRNMGFQFAGKAVYTAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFIVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVTVVRNLSQKTHWRIKTHLAISHLDVHKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNIDPENQALLILISCFVKTSHFEEYLCVKVRGFNLLFKVQLRLIKKMMCLDIIALILHICIIPMFDLLF* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00446 472 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 2 432 IPR045042 -
Eupl13g00446 472 Pfam Mechanosensitive ion channel 240 431 IPR006685 GO:0016020|GO:0055085
Eupl13g00446 472 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Eupl13g00446 472 Gene3D - 193 297 - -
Eupl13g00446 472 Gene3D - 299 354 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00446 Eupl-Chr13 6135197 6143579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00446 1 432 Mechanosensitive Ion Channel Family AT1G58200 69.053 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00446 K22047 - ming:122084267 718.383