Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00436 ATGAGAACTGCGTCTCCTTTGCCCGATCTCTCTCTACAGATCAGCCCACCAACGATTTCAGACTGTGAATTGATGAGGAAAGTGTTACACAGCGACATGAGTTCGGCGACGGATTCTGGCAGTAGTGGAAGTACTGATGTTAGCCATGACCAAGGTTCTTCGTTCTTGCACTTAGATCTTCCTGGGGTTGAACTTGAACCCACGTTGAGTCTAGGGTTCGAGACAGCATCTTTGGATCTTCCACCTCTACATCTACATCGGAACCTTCATCATCTCCATCAAATCAATGGTCGTGATCAGTTTAAGAGAAATTCGAGAATGGTTAGTGGAGGCAAGAGAAGCATCAGAGCTCCTAGAATGAGATGGACCACAACTCTCCATGCCCATTTTGTTCATTCTGTGCAGCTCCTTGGTGGCCATGAGAGAGCAACACCCAAATCAGTTTTGGAGTTGATGAATGTGAAGGATCTAACACTGGCTCATGTTAAGAGTCACTTACAGATGTATAGAACAGTGAAGAGCACTGACAAAGGAGCAGGCCAACGGCAGACAGATATGCCTTTGAATCAAAGGACAGGAATGGTTGAAGTGGAGGATGGATTATCCTGTGAGAAAGAAGAGATCAACTCTCTCAACCCTCCACCATCACTACCAAAATCTCCTAGGGGTTCATGGTCATCAATGGAGGGGAATACCTGTAGCCCATCAACTCAAGAAAATGCATCAGCTCATTCTCATTCCAAATCAAACGAGTTTATAAATGAAAGAAGCAAGGTGGACGTCGGACATGGCGTAGGCGTCCACATGTCACACAATGAGAGGGAGAAGTTGTATTCTTTGGCGTTGCCTAACCTAGACTTCACCCTGGGAAGACAAAGTTGGCAAATGGAATATACTGAACCTTCCAATGACTTAACCCTTCTCAACTCTTAA 933 0.4534 MRTASPLPDLSLQISPPTISDCELMRKVLHSDMSSATDSGSSGSTDVSHDQGSSFLHLDLPGVELEPTLSLGFETASLDLPPLHLHRNLHHLHQINGRDQFKRNSRMVSGGKRSIRAPRMRWTTTLHAHFVHSVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGAGQRQTDMPLNQRTGMVEVEDGLSCEKEEINSLNPPPSLPKSPRGSWSSMEGNTCSPSTQENASAHSHSKSNEFINERSKVDVGHGVGVHMSHNEREKLYSLALPNLDFTLGRQSWQMEYTEPSNDLTLLNS* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00436 310 FunFam Myb family transcription factor 116 174 - -
Eupl13g00436 310 MobiDBLite consensus disorder prediction 221 248 - -
Eupl13g00436 310 SUPERFAMILY Homeodomain-like 115 172 IPR009057 -
Eupl13g00436 310 MobiDBLite consensus disorder prediction 206 252 - -
Eupl13g00436 310 MobiDBLite consensus disorder prediction 32 53 - -
Eupl13g00436 310 Gene3D - 117 174 - -
Eupl13g00436 310 NCBIfam myb-like DNA-binding domain, SHAQKYF class 118 171 IPR006447 GO:0003677
Eupl13g00436 310 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 297 IPR044847 GO:0000976|GO:0006355|GO:0010158
Eupl13g00436 310 MobiDBLite consensus disorder prediction 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00436 Eupl-Chr13 6011255 6014690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00436 1 191 G2-like Transcription Factor Family AT5G42630 54.872 1.42e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl13g00436 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00436 - - nnu:104595831 371.318