Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00424 ATGATGCTCTATTTCATTACCACGATAGCCATTTTACTTCTCATGATCTTACTCGTATGCATCTTTGTAGAGGCCCGCCGGTTATTCACTAGAATTGTCGAAAAGCCAGTCGAATTTAGTGTCGGAGAGGCGACCAATGCAACGAATCCAGTATCGATACTAGAGGTTAAGGTCACCCTGCCTAGTAGACTCATATTCAGTGATGAGGCTGTAGCAAGTAAGTATGACCCATCAGAATTGGTTCAACTTCCACACGTCAGACTCGACGGCGGGACACTGGGACCTCTGTTCAAGGTTGTACTAGATGGTGGCTCAATTGTTGCGGTTCGTAAAATTCGAGAAGGTTTGGTGAAGCCAGATGACTGTGACAAGTTGCTAAACTTCTTTGGCAGGATTCATGGTAGATGTCTTTTGCCTATACTGTTCAGTTTCTGGTATGGTGAAGAAGCCTTTGTTGTGTATGAGTACATGTGTTTGGGAAGTCTAGAGGAGCTCTTACATGGACGGGAGGGAATCCAGTTCACTCCCCTAAGTTGGGAAACTCGACGTTATATAGCTCTTTGTGCATCAATAGCTGTGGCCTCCATTCACTCTCAAGTCTCAGAGAAAGGAGAAGCTCTTGTTTGGGGTGTGATCAAAGCCTCCAACATCTTAATTCGAATAGATTTCACTGCACATGGGTTTACTAAAAAATCTGATGTGTACAGCTTCGGAATCCTACTTCTAGAACTTATCACTGGCAAGAAACCCATGGTGAGTGATGAACATGGAGAATTGAAATTAGTAAACTATGTCAAATGTAAGAGAAAGATGGAGGGATTGCAAGGTATATATGATGAGAAAATGACAGAGATAAAAGATACCGTGGCCAACATGGTTGAAATTGCTGAGCTTTGCCTCTTACAGGACCCAAATGAGAGGCCTACCATGGATAGAGTGGTGCAGATGATCCAAGAATTGTAG 963 0.433 MMLYFITTIAILLLMILLVCIFVEARRLFTRIVEKPVEFSVGEATNATNPVSILEVKVTLPSRLIFSDEAVASKYDPSELVQLPHVRLDGGTLGPLFKVVLDGGSIVAVRKIREGLVKPDDCDKLLNFFGRIHGRCLLPILFSFWYGEEAFVVYEYMCLGSLEELLHGREGIQFTPLSWETRRYIALCASIAVASIHSQVSEKGEALVWGVIKASNILIRIDFTAHGFTKKSDVYSFGILLLELITGKKPMVSDEHGELKLVNYVKCKRKMEGLQGIYDEKMTEIKDTVANMVEIAELCLLQDPNERPTMDRVVQMIQEL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00424 320 Gene3D Transferase(Phosphotransferase) domain 1 75 225 - -
Eupl13g00424 320 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 320 IPR046959 -
Eupl13g00424 320 ProSiteProfiles Protein kinase domain profile. 82 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00424 320 Gene3D Transferase(Phosphotransferase) domain 1 226 320 - -
Eupl13g00424 320 Pfam Protein tyrosine and serine/threonine kinase 226 316 IPR001245 GO:0004672|GO:0006468
Eupl13g00424 320 SUPERFAMILY Protein kinase-like (PK-like) 87 317 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00424 Eupl-Chr13 5844164 5845443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00424 88 320 Receptor kinase-like Gene Family AT5G16590 32.714 1.25e-35 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl13g00424 PK_Tyr_Ser-Thr 3.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00424 - - rcu:8275562 323.553