Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00405 ATGGCCGTCAGAAAATCAAACAAACTACCTCAAACAGCAGTCCTTAAGCAAATTCTGAAGAGATGTTCAAGCTTAGGCAAAAAACAAGGCTACGACGAAGAAGGCCTTCCTGTTGACGTACCAAAAGGCCACTTCCCTGTCTACGTTGGAGAGAAGAGAAGCAGATTCATTGTTCCAATTTCCTTCTTGACCCATCCTGAGTTTCAAAGCCTACTTCAAAGAGCCGAAGAGGAATTCGGGTTCGATCACGACATGGGTCTTACTATTCCTTGTGAAGAAGTTGTATTTCGCTCTCTAACATCAACCCTCAGATGA 315 0.4381 MAVRKSNKLPQTAVLKQILKRCSSLGKKQGYDEEGLPVDVPKGHFPVYVGEKRSRFIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCEEVVFRSLTSTLR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00405 104 Pfam Auxin responsive protein 27 102 IPR003676 GO:0009733
Eupl13g00405 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 37 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00405 Eupl-Chr13 5575234 5576231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00405 1 99 Calmodulin-binding Proteins AT3G43120 43.564 2.51e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00405 K14488 - nnu:104589702 200.29