Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00402 ATGTCAGCCGGACTCGGAAACTGCAGCAAAATCCGGCACATAGTCAGACTCCGGCAACTACTCAGGAGATGGCGTCACAAAGCCCCATTGGCAGCTCGCATTTCCGGTAAAATACCATCTGATGTTCCATCCGGACACGTGGCGATCACCGTGGGCACTAATTGTAGGAGATTTGTTGTGCGGGCGACGTACCTGAACCACCCAGTCTTCAAGAAACTCCTCGTCCAAGCTGAAGAAGAGTATGGTTTCACTAACCAAGGTCCCTTGGCGATTCCCTGCGACGAGTCACTCTTCGAAGAAATCCTCCGACTCCTTTCCCAATCCGAGTCTACCAACTCAGCTCGGTTCATCAATCTCGACGATTTTCAGAGACACTGCCACGTGGGTTTGAGTAATAATCTCGATTTCTGGCCTGAATCTAGGCCGCTCCTTCACGGGAATCGGGATCCCTCCAGAGTCCAGAAATTGAATCGAGTCAATTGA 483 0.5114 MSAGLGNCSKIRHIVRLRQLLRRWRHKAPLAARISGKIPSDVPSGHVAITVGTNCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESLFEEILRLLSQSESTNSARFINLDDFQRHCHVGLSNNLDFWPESRPLLHGNRDPSRVQKLNRVN* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00402 160 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 102 IPR003676 GO:0009733
Eupl13g00402 160 Pfam Auxin responsive protein 16 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00402 Eupl-Chr13 5523179 5523661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00402 5 146 Calmodulin-binding Proteins AT4G34750 52.027 8.41e-47 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00402 K14488 - cave:132190292 250.366