Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00395 ATGGAAAGCACAAGCCAGTATGATTCATTGGATGCTGTTGATGAGGTACTTGAAGCCGTATCCGAATGCGGAGACAAAGCGGCAAATCCTGATACTCATGCAGCAGAGGAACTTCCTGCGTCAAACGAATTGCATGCACTTAATGAAATGAAGTGTTCTGTACCATTTGTTGGCATGGAGTTTGATTCTCATAATAAGGCATTTCTCTTCTACAATGAGTATGCTAGGATTGTGGGTTTCAGCGTACGGAAAGGCAAAGTTCGTAGGTCAAATATTAACGGCGCATTTCTTTTCCGTCGGTTTTGTTGTTCGAAGGAGGGTTTTCCCCGAAAAAGCTGTGAAAATGGTAATAATCAACCAAATCAAGTGAAAGATGGTGTTGTAGTGAAGGTTGTCACACAAATTCAACCGACCACACGAGTAGGCTGCAATGCGAGGTTAGACGTGAAAAAAACAACCGACGGTAGATGGGTTGTGCAAAATTTTGTTGAGGAACATAACCATGAATGTGCTGGTCTGGGAGAAACACATTTGCTTAGGTCTCACAAACACATGCAATCTACTCAGGGACAACAAGTTAATACAATGCCCGAGGCAGGCATGAGACCAAAACAAATGACACCTTACTTAACAGGAGAAGCTGGTGGGAGTGAGAATGTTGGAGATAAAGTGACAAATCCCGATACTATTGCAGCAGAGGAACTTCCTTTGCCAAACAAATTATGTGCACTTAATGAAGTGTCGTCTTCCAAACCATATGTTGGGATGGAGTTTGATTCTCCTCATAAAGCATATCTCTTCTACAATGAATATGCTAGGATTGTGGGTTTCAGTGTACGGAAAGCAAAAAATCGCAGATCAAATATTAATGGAGCACTTCTCTTTTGTCGATTTTGTTGTTCGAAGGAAGGATATCGACGCAATAGGTGTGGTAATGATAATGATGTACAAAAGAGAGTGAAAGATGGTGTTGTAGTGAAGGTGAAAAAACAAATTACACCTTCCACAAGAGTTGGTTGCAGTGCGAAGTTAGACCTGAAGAAAACGATTGATGGTAAATGGTTTGTACAAAAATTTGTCGAGGAACACAACCATGAATGTGCTAGTCTGGGAGAACTGCATTTGCTGAGGTCTCATAAACGCATCAAATTTATTCATGGAGAACCAATAAGTACAATAACTGATGCGAGCACAAGACCGAAAAAAGTACTTAAAAGAGTAGTGTCCTACTTAACAAGGGAAGCTGGTGGGAATGAGAATGTTGGCTCTATTGAATCATGTTTAAGAAATCGCATAAATAAGAAAAGGAGGAAAAAACTTGAAAAGGGAGAAGCACAGGTTCTTTTCAATTACTTTAGGCAGATGCAAACCGAGAATCCATCCTTCTATTATGCCATAGAAGTTGATGAAGAGGATCAGATGTTAAACTTCTTTTGGGCTGACGCAAGGTCAAGGATGGATTTTCGTTACTTTGGGGACGTGATTTGTTTTGAGACAACCTATGGGACTAACAAGTACGGACGGCCATTTACTCCAATTGTAGGTGTAAATCATCACCTTCAGACAGTCTTGTTTGGTTGTGCAATACTTTTGAATGAAACCAAGGAGTCATTTGCTTGGTTACTAGAGACATTTTTGCATGCGATGTCTGGCTGTAATCCAGTTGCTATAATTACCGATCAAGATGCAGAAATGGCAAAAGCGATTGAACAAGTGTTACCGGGAACTCACCACTGTCTATCTCTATGCCACATCTTCCAGAATTCAGCTAAAAATTTGAGTCATTTGTACAATACAGAGGGCAGCTTTAGTACAGATTTCAAGAAATGCATCTATGAGCCTCAGTGTTGCGATGAGTTTGAGTCAAGGTGGGTGTCGTTACTTGACAAATATAAACTTCATGATAATGAGTGGCTCAATAATATGTACAACAAACGACACAAATGGGTTCCGGTCTACTCACGGCACATCTTCCATGCAGACATGACAACGACTCAACGAAGTGAAAGTATACACTCCTTCTTTGATGGATACCTGAACAGGTCACTTTCTCTTAGTGAGTTTGTTAAACAGTATGAAAATGCACTTGTTAGTAGTCGTGAAAAGGAAACTTATGAAGACTTTAAATCCCACCAAACAAGGCTTGTTTTGAAGTCTGACCTCCCAATGGAAAAACAAGCGGCTGGCATTTATACAATATCAGTGTTTAACGAGTTCCAGAAAGAGTTTTGTGGTAGCTTTAACCACATTGCTGAAGAAACGGAAAGGGTAGGGACAAATCGGACATTTATGGTGTCAAGGTTGGGGCAAAACAGTAAATGCCTTGTTAATTTCAACTCTTGTGATAAGGATATTCAGGTTACTTGTAGTTGTCAAAATTTTGAGTTCATGGGCATTCTATGTAGGCATATCTTGACAGTCTTCACAGTGATAAATGTTATGTTGGTCCCAGAGGCCTATATTAAAAAGAGGTGGACAAAAAGAGCCAAGTGTGGGGTTGTTCCAGACAAAAGTGAAAGGGAAATGCAAGGTGACTGTCAGAAATCATTGGCCTTGCGCTACAGTGATCTTTGCCACCTAGCTCTTAATCTTTCTACCAGGGGTGCGATCTCTATAAAGGCTTACCAAATAGCAAAGTGTACCATTGAAATGACATTAAAAGAAATGGAAAATGTTGCTGAGGAAGACTTCAGCAGCACTCAAATTGAGGGCATTATAAGTTCACATCGTCCGGTTGAGGTTGTTAAGAATATTGGGAGCTCAACACGCCTTGTGGATGAAGACAATCAGACGTTAACTACAGTGAACCAAATAGCTTCGTTCGATCCGCCATGTGTGAGAACAGGAGGGCAACCATTCAAAAGAATCACAACTTCGCTGGGGGAGACCCAAAGGCAAAAGAAAGTCCGAACAGGGCCTGAATCAAGTTACCGCACTGAGCCACCTTCACATTCCAAGATTAGGGGAACGGGTTAA 2976 0.4093 MESTSQYDSLDAVDEVLEAVSECGDKAANPDTHAAEELPASNELHALNEMKCSVPFVGMEFDSHNKAFLFYNEYARIVGFSVRKGKVRRSNINGAFLFRRFCCSKEGFPRKSCENGNNQPNQVKDGVVVKVVTQIQPTTRVGCNARLDVKKTTDGRWVVQNFVEEHNHECAGLGETHLLRSHKHMQSTQGQQVNTMPEAGMRPKQMTPYLTGEAGGSENVGDKVTNPDTIAAEELPLPNKLCALNEVSSSKPYVGMEFDSPHKAYLFYNEYARIVGFSVRKAKNRRSNINGALLFCRFCCSKEGYRRNRCGNDNDVQKRVKDGVVVKVKKQITPSTRVGCSAKLDLKKTIDGKWFVQKFVEEHNHECASLGELHLLRSHKRIKFIHGEPISTITDASTRPKKVLKRVVSYLTREAGGNENVGSIESCLRNRINKKRRKKLEKGEAQVLFNYFRQMQTENPSFYYAIEVDEEDQMLNFFWADARSRMDFRYFGDVICFETTYGTNKYGRPFTPIVGVNHHLQTVLFGCAILLNETKESFAWLLETFLHAMSGCNPVAIITDQDAEMAKAIEQVLPGTHHCLSLCHIFQNSAKNLSHLYNTEGSFSTDFKKCIYEPQCCDEFESRWVSLLDKYKLHDNEWLNNMYNKRHKWVPVYSRHIFHADMTTTQRSESIHSFFDGYLNRSLSLSEFVKQYENALVSSREKETYEDFKSHQTRLVLKSDLPMEKQAAGIYTISVFNEFQKEFCGSFNHIAEETERVGTNRTFMVSRLGQNSKCLVNFNSCDKDIQVTCSCQNFEFMGILCRHILTVFTVINVMLVPEAYIKKRWTKRAKCGVVPDKSEREMQGDCQKSLALRYSDLCHLALNLSTRGAISIKAYQIAKCTIEMTLKEMENVAEEDFSSTQIEGIISSHRPVEVVKNIGSSTRLVDEDNQTLTTVNQIASFDPPCVRTGGQPFKRITTSLGETQRQKKVRTGPESSYRTEPPSHSKIRGTG* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00395 991 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 247 891 IPR031052 GO:0006355
Eupl13g00395 991 SMART 26again6 787 814 IPR006564 GO:0008270
Eupl13g00395 991 MobiDBLite consensus disorder prediction 976 991 - -
Eupl13g00395 991 Pfam SWIM zinc finger 786 811 IPR007527 GO:0008270
Eupl13g00395 991 MobiDBLite consensus disorder prediction 952 966 - -
Eupl13g00395 991 MobiDBLite consensus disorder prediction 952 991 - -
Eupl13g00395 991 ProSiteProfiles Zinc finger SWIM-type profile. 774 812 IPR007527 GO:0008270
Eupl13g00395 991 Pfam FAR1 DNA-binding domain 70 170 IPR004330 -
Eupl13g00395 991 Pfam FAR1 DNA-binding domain 267 368 IPR004330 -
Eupl13g00395 991 Pfam MULE transposase domain 494 588 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00395 Eupl-Chr13 5416609 5425591 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl13g00395 FAR1 4.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00395 - - psom:113289875 1082.4