Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00389 ATGGTGAGATCGACGAGCTCTTGCTTCAAGATCATTTCTTGTGGCAGCGATCCTGTTGATAAGGATGATTTCGAACAGACGGAGGGCAAAGGTTCAACAGACAAGCGTGGGTGGAGTTTCCGGAAGAGATCTGCCAGGCATCGAGTGCTAAGCAACACTATGATCTCAGAAACCCCCTCTCCTGGAAATAAAGAGAGCCTAGAATCCTCTAATATCGACTTCCATGCACAGACTAACCCCACTGTTCCTGAGAAAATCTCTGTATCGCAATGGACAGATGAGACGCCCCCATTGTCAACTGCAGTGAACTCAAAAGTACCTGCAGAAAGTTTCGAGTTCCATGCACAGACTAATCCCACTGTTCCTGAGCAAATCTCTGTATCTCAATGGACAGATGAGATGCCCCCATTCTCGACTGCAGTGAACCCAAAAGTACCCGATCCCTTACTTTTCGCGGATAATACCTGCAAGATTGATTCCTTAATTTCCACAGAGAGTGCCAGTAAGATTGACCCCTTAACTGCCATGGAGAATGCCAGTAAGATTGATCCCTTAACCGCCATGGAGAATGCCAGTAGTAAGGATCCCTTAACCGCCATGGAGGATGTCATTAAGATTGATCCCTTAACTGCCATGGAGAATTCCAAAGCGGATCTCAACCTGGAGGAATCTCTTGCCATTGCCATCCAGTCCGCTATTAGAGGATACTTGGCCCAGAGAGCACTCTTAAAGCTTAAGAATGTAGTTAAGTTGCAAGCTGCTGTACGTGGGCATTTGGTCAGGAGGCAGGCCGTGGGAACTCTACGTTGTGTTCAAGCCATTGTCAAAATGCAGGCTCTTGTGCGTGCTCGCCGTGCTCGTATGTCAGGGTCAGTTATTGAAGAGAAGCTTGATGGGAAACATGAAAGAAATAACAAGAGTGTGAAGCTTTTGGGAAAAGAAAATTTTGGAACAAAAGCAAACATAAATTACTCTTCTACAGAGAAGTTGCTTAGCAATGGGTTTGCTCGTCAGCTCTTGGAATCGACACCAAAGAAAAAACAAATTCACATCAAATGTGATCCTTCAAGACCTGATTCTGCATGGAAATGGTTGGAGAGGTGGATGACTGTATCGTCGTCAGAGTTTGCACAGACACAGAAACCACAATTCAGTCCAGAGTATCAGGCAAAAGGAGAAATTATTGATACCACTGCTTCTGAAGTAGGAACTGAAATTCCAGCTGAAATCAGCTCGGAGTCAGTGGATATGAAGTCCAGTATTAGGGAAACAGCAGTGCCACTTGAGGGCGAAGAGAATTTGATAACTTACGATGCAAATAACTTTGATTTTAATGCCTGTTTTCCAACCCCTTCTTCAATAATTAATACAAATCAAACAGAGATGCAACTGCCTCAGCTTGAGGATGCTGGTGTGAGCAAAGCACAAGAGACCTCTTCAAAGATAGATACAAATCAAACAGAGATGCAATTGGATGCCGCTTCTCAAAATTCCATCTCTGATAAGCTTAAGGAAGACGGTGAACAACCGAAACATTCTACGAAAAGGGTCGCCTCTGAACAAGCAGAGGCCGAGGGCAAGAAGTTTGTGCTTGGAGCTAGAAAGGCATGTAATCCTGCATTTGCTGCTGCCCAGTCAAAATTTGAAGAGCTTAGTTCAACAACCACCTCTGGTAGGTCGATCAGTTATAATCATCAAGATGCTGGAGTAGAATCGAAATTGGACAGTCTTTCATCTCCAGCAGATTCTCTGACAAGGACCAAGGAACTTAGACTGGCAGAAAATTTAATCTCTCATCATCCAAGAGTTCGTGTGGGGAGTTCAGAATGTGGCACCGAACTTTCTATTTCTTCCACTCTTGATTCACCAGATAGATCCGAAGTTGGAGATGGGGAATTTGACAATGAAGCCAAAGTGGCGGAAGAAGTGATTTCTGATCCAAATAACATTACTGATAATGCATCTAATCTTGGAAATCTAGATGGAAATCTAGATGTTGAAGCAATGAACAATTCTTCCATGTCTCACAATTCAACCAACCCTGTTGCTTTTCTGCCAGGGAAGCTTGAAGATGTTAACGGAGAATCTGTTGATCCAGTTGTAGCTGTAGACTCCCTCTGGGTAGAGCAGCAGCCAGAGAGAAGTGCATTGGATGTGCAGATCCAACTGGAGACTACAACAGATCAACAAGCATACAGATCGTCGCCAGAAGGATCTCCAAGAAGTCATATAACGGCCCCTGAATTGCATGGGACACCATCAAGTCAGGTATCAGTGAAAGCTAAAAGGAAAAAAGTGGATAAGAGTGGATGCATCCAAAACAGAAAATCACAGTCAGCAGGCAAGAGGTCCCCATCGAATCCAAACCACGATTCAGGTGTGAGAAGTAGTACGGAGCAATTGACGAAGGAACCGAAAAATGGGAAAAGGCGCAACTCTTTTGGTTCAGTGAGACCTGATCATGTTGACCAAGAGCCAAGCGATGGCAATAGTAATTCCCTCCCCAATTACATGCAAGCCACAGAGTCTGCAAGGGCCAAAGCCCAGGCGAACAACTCTCCAAGGTCAAGACCGGACGTGCAAGACAAGGATATTTACATCAAGAAGCGACATTCCCTACCTGGTGCAAACGGAAAGCAGGGCTCCCCTCGCATGCAGCAGGCAACATCCCAAATTCAACAGGGTGCAAAGGGAATCCATACACGTTCTCCTGGAGAGAAAATGGCAAAGGTGATTTGA 2739 0.4498 MVRSTSSCFKIISCGSDPVDKDDFEQTEGKGSTDKRGWSFRKRSARHRVLSNTMISETPSPGNKESLESSNIDFHAQTNPTVPEKISVSQWTDETPPLSTAVNSKVPAESFEFHAQTNPTVPEQISVSQWTDEMPPFSTAVNPKVPDPLLFADNTCKIDSLISTESASKIDPLTAMENASKIDPLTAMENASSKDPLTAMEDVIKIDPLTAMENSKADLNLEESLAIAIQSAIRGYLAQRALLKLKNVVKLQAAVRGHLVRRQAVGTLRCVQAIVKMQALVRARRARMSGSVIEEKLDGKHERNNKSVKLLGKENFGTKANINYSSTEKLLSNGFARQLLESTPKKKQIHIKCDPSRPDSAWKWLERWMTVSSSEFAQTQKPQFSPEYQAKGEIIDTTASEVGTEIPAEISSESVDMKSSIRETAVPLEGEENLITYDANNFDFNACFPTPSSIINTNQTEMQLPQLEDAGVSKAQETSSKIDTNQTEMQLDAASQNSISDKLKEDGEQPKHSTKRVASEQAEAEGKKFVLGARKACNPAFAAAQSKFEELSSTTTSGRSISYNHQDAGVESKLDSLSSPADSLTRTKELRLAENLISHHPRVRVGSSECGTELSISSTLDSPDRSEVGDGEFDNEAKVAEEVISDPNNITDNASNLGNLDGNLDVEAMNNSSMSHNSTNPVAFLPGKLEDVNGESVDPVVAVDSLWVEQQPERSALDVQIQLETTTDQQAYRSSPEGSPRSHITAPELHGTPSSQVSVKAKRKKVDKSGCIQNRKSQSAGKRSPSNPNHDSGVRSSTEQLTKEPKNGKRRNSFGSVRPDHVDQEPSDGNSNSLPNYMQATESARAKAQANNSPRSRPDVQDKDIYIKKRHSLPGANGKQGSPRMQQATSQIQQGAKGIHTRSPGEKMAKVI* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00389 912 ProSiteProfiles IQ motif profile. 244 273 IPR000048 GO:0005515
Eupl13g00389 912 SMART iq_5 244 265 IPR000048 GO:0005515
Eupl13g00389 912 SMART iq_5 221 243 IPR000048 GO:0005515
Eupl13g00389 912 MobiDBLite consensus disorder prediction 469 498 - -
Eupl13g00389 912 ProSiteProfiles IQ motif profile. 222 250 IPR000048 GO:0005515
Eupl13g00389 912 MobiDBLite consensus disorder prediction 17 40 - -
Eupl13g00389 912 MobiDBLite consensus disorder prediction 726 912 - -
Eupl13g00389 912 MobiDBLite consensus disorder prediction 802 825 - -
Eupl13g00389 912 MobiDBLite consensus disorder prediction 772 801 - -
Eupl13g00389 912 MobiDBLite consensus disorder prediction 610 624 - -
Eupl13g00389 912 Pfam IQ calmodulin-binding motif 246 263 IPR000048 GO:0005515
Eupl13g00389 912 Pfam IQ calmodulin-binding motif 225 241 IPR000048 GO:0005515
Eupl13g00389 912 Pfam Protein of unknown function (DUF4005) 819 896 IPR025064 -
Eupl13g00389 912 Gene3D - 222 269 - -
Eupl13g00389 912 MobiDBLite consensus disorder prediction 879 898 - -
Eupl13g00389 912 MobiDBLite consensus disorder prediction 17 39 - -
Eupl13g00389 912 MobiDBLite consensus disorder prediction 499 524 - -
Eupl13g00389 912 MobiDBLite consensus disorder prediction 469 524 - -
Eupl13g00389 912 PANTHER IQ-DOMAIN 5-RELATED 188 881 - -
Eupl13g00389 912 MobiDBLite consensus disorder prediction 726 741 - -
Eupl13g00389 912 MobiDBLite consensus disorder prediction 826 856 - -
Eupl13g00389 912 MobiDBLite consensus disorder prediction 607 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00389 Eupl-Chr13 5376885 5383393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00389 214 897 IQD Protein Family AT1G19870 35.470 2.78e-95 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00389 - - nnu:104607486 925.62