Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00386 ATGGAAGAAACGGTAGAATCTCGTAATGATGTGCCACAACGTCTTCAATCTTCGTTCGGAACTTCATCGTCTTCAGTTCCGAAACAACACTTATCGACAAACCGATTCGATCTTCCTCATCTAAATACTTCGCAAATCCGTGCTCCTATGCGACATTTCTCACAGAATTTTAGTCCAGAGAACAACAAGAGACCTGGTATACCCCCATCACACCCGCACATTCCACCAGCATCTCCCTATTCGCAGATCCCAGTGTCTCGATCTCCCGCTCAGCCATTGGGTTCTCAGAATTTTAGCCCGGGACCTTCCCATTCTAGATCGTTGTCACAACCCGCATTTTTTTCTTTGGATTCCTTGCCCCCATTGAGCCCGTCACCTTATTCGTCAACCTCGATATCTGACCTGGCTTCTGTGGATGTGTCCATGGAAGATCGAGATGGGAATTCACACACCCCACCTCCTCCACATTTCACAAGAGGTAACTCTCCCCGGGTCGGTGAGAACCTCCCCCCTCGTAAAGCACACAGGCGTTCCAGCAGTGATATTCCGTTCGGGTTCTCCACTGTGATCCAATCTTCTCCTCCACTCATCCCGCTCAGGAGCCCGGGCATTTTGGACCGGTCAGCGTCTGCAAGAGAGAATTCAGGAATGGTTAAGCCGATTCAATTGGTAAAACGGGAATCAGATTGGGATAGAGATGGCAATAAGAATGCTGAAGGGATGGGTGAGAGGAAATCTGAAGGGGAAGTAATAGATGACTTATTCTCTGCATATATGAATTTGGACAACATGGATACATTGAACTCCTCTGGGACAGAGGACAAGAATTGTCACGAGAACCGTGAGGATTTAGATAGCAGAGCCAGTGGCACAAAAACGAATGGGGCTGATAGCAGTGATAATGAAGCAGAAAGCAGTGTAAACGAAAGTGGAAGCAGCATGCCCCAGGCGAACCTCAGTTCCACTGCAGAGAAGAAGGAAGGGACCAAAAGGTGTGCAGGAGGAGATATTTCTCCAACCACCCGTCACTGTAGAAGTGTTTCCATGGATAGCTTCATGGGCAAGCTGCCAAACTTTGGGGATGAATCACCGAAGTTGCCACCTTCTCCGGGATCACGGACGGGTCAACACTCCCACAGCAACTCAATGGACGGAAACTCCTCTACTTTTAGCTTGGATTTTGGGAATGGTGAGTTCAGTGGGGCCGAGTTGAAAAAGATTATGGCAAATGAAAAACTTGCCGAGATTGCATTGACGGACCCCAAACGTGCCAAAAGGATTTTGGCTAATCGGCAATCAGCTGCTCGTTCTAAGGAACGGAAGATGAGGTACATCTCGGAGTTGGAACACAAGGTGCAGACTCTACAGACAGAAGCTACCACATTATCTGCACAGCTGACACTGTTACAGAGAGATTCTGCTGGTCTCACGAGTCAGAACAATGAGTTGAAATTCCGTCTTCAAGCAATGGAGCAACAGGCCCAACTCAGAGATGCTCTAAATGAGGCATTGACCGCGGAAGTCCAGCGATTGAAGCTGGCTACTGCAGAGTTGGGTGGGGAGGTACGCTCTACCAACTGCTTAGCTCAGCAGCTATCCATGAATCCCCAGATGTTCCAGATGCAGCATCAGCAGTCTACCCAGCACAATATGTATCAGTTGCAGCAGCAACAGCATCAACAGCAGCCCCCACCACCACCACAGCAGCAGCAGCAGAACAACAGTACAGCTACAAAGCGTGAGTCAAACCAATAG 1755 0.4889 MEETVESRNDVPQRLQSSFGTSSSSVPKQHLSTNRFDLPHLNTSQIRAPMRHFSQNFSPENNKRPGIPPSHPHIPPASPYSQIPVSRSPAQPLGSQNFSPGPSHSRSLSQPAFFSLDSLPPLSPSPYSSTSISDLASVDVSMEDRDGNSHTPPPPHFTRGNSPRVGENLPPRKAHRRSSSDIPFGFSTVIQSSPPLIPLRSPGILDRSASARENSGMVKPIQLVKRESDWDRDGNKNAEGMGERKSEGEVIDDLFSAYMNLDNMDTLNSSGTEDKNCHENREDLDSRASGTKTNGADSSDNEAESSVNESGSSMPQANLSSTAEKKEGTKRCAGGDISPTTRHCRSVSMDSFMGKLPNFGDESPKLPPSPGSRTGQHSHSNSMDGNSSTFSLDFGNGEFSGAELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTSQNNELKFRLQAMEQQAQLRDALNEALTAEVQRLKLATAELGGEVRSTNCLAQQLSMNPQMFQMQHQQSTQHNMYQLQQQQHQQQPPPPPQQQQQNNSTATKRESNQ* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00386 584 MobiDBLite consensus disorder prediction 369 389 - -
Eupl13g00386 584 SMART brlzneu 418 482 IPR004827 GO:0003700|GO:0006355
Eupl13g00386 584 Pfam bZIP transcription factor 422 480 IPR004827 GO:0003700|GO:0006355
Eupl13g00386 584 MobiDBLite consensus disorder prediction 65 79 - -
Eupl13g00386 584 CDD bZIP_plant_RF2 423 474 IPR044759 GO:0003700|GO:0006355
Eupl13g00386 584 MobiDBLite consensus disorder prediction 224 249 - -
Eupl13g00386 584 MobiDBLite consensus disorder prediction 181 195 - -
Eupl13g00386 584 SUPERFAMILY Leucine zipper domain 422 473 IPR046347 GO:0003700|GO:0006355
Eupl13g00386 584 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 63 580 - -
Eupl13g00386 584 MobiDBLite consensus disorder prediction 10 63 - -
Eupl13g00386 584 MobiDBLite consensus disorder prediction 263 389 - -
Eupl13g00386 584 Coils Coil 438 493 - -
Eupl13g00386 584 MobiDBLite consensus disorder prediction 272 288 - -
Eupl13g00386 584 MobiDBLite consensus disorder prediction 289 323 - -
Eupl13g00386 584 MobiDBLite consensus disorder prediction 541 584 - -
Eupl13g00386 584 FunFam probable transcription factor PosF21 421 474 - -
Eupl13g00386 584 MobiDBLite consensus disorder prediction 541 559 - -
Eupl13g00386 584 MobiDBLite consensus disorder prediction 81 137 - -
Eupl13g00386 584 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 420 483 IPR004827 GO:0003700|GO:0006355
Eupl13g00386 584 MobiDBLite consensus disorder prediction 1 249 - -
Eupl13g00386 584 Gene3D - 421 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00386 Eupl-Chr13 5323439 5329940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00386 1 540 bZIP Transcription Factor Family AT4G38900 59.140 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl13g00386 bZIP_1 6.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00386 - - nnu:104602055 858.211