Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00382 ATGGAGTCGATGGAATCGTGTGTTCCACCTGGTTTCAGGTTCCATCCGACGGACGAGGAACTAGTTGGATATTATCTGAAGAAGAAGGTAGCTTCGCAGAAGATCGATCTTGACGTTATCAGAGACATTGATCTTTACAGAATCGAACCATGGGATCTCCAAGAGCGGTGTCGGATCGGTTATGAGGAACAGAATGAGTGGTACTTCTTCAGCCACAAAGACAAGAAGTATCCAACGGGGACGCGAACGAATAGGGCGACCATGGCCGGATTCTGGAAGGCAACGGGGCGTGACAAAGCAGTGTATGAAAAGATGAGGCTCATAGGTATGAGGAAGACACTAGTATTCTACAGAGGGAGGGCACCCAATGGACAGAAGACAGATTGGATCATGCACGAGTACAGGCTCGAGTGCGAGGAGAACGGACCTCCACAGGAAGAAGGCTGGGTTGTCTGCCGGGCTTTCAAGAAACGAACAACCAACTGCCAAACAAGAGGTGGAGAAGCGTGGGATTCTAGTTACATCTATGATGAGCCAAGTGGGGTCAGCTCCATCGTTGATCCTATCGATTATATTGCAAGGCAGCCCCAGAATTTCTTCTGTAAGCAGGAGATTGAAGCGGATAATTTGAATTTCTTGCACTCTGATAACTTTGTACAGCTTCCTCAGCTAGAGAGCCCTTCTTTACCGCTAGTAAAGAGGCCAAGCTTCATGTCACTGATATCGGAGAACAATGAAGATGAGGAGCAGATAAGAGGGTGTAACAACATGGAGAAAGTGACCGATTGGAGGGCCCTCGACAAGTTTGTTGCTTCTCAGTTGAGTCAAGAGGATAGATATGATGGTGAAGGTGTCTCTAACTTTGGAGCTCATCGTAATTCAGACATGTCGCTGCTTTTATTGCAGAGTAGTAGGGAAGAAGGGAACAAGTTAAATGGGTTCATGAGTTCTGGTTCAGACTGTGACTTTGGTATTTGCATATTTGATAAATGA 993 0.4653 MESMESCVPPGFRFHPTDEELVGYYLKKKVASQKIDLDVIRDIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYEKMRLIGMRKTLVFYRGRAPNGQKTDWIMHEYRLECEENGPPQEEGWVVCRAFKKRTTNCQTRGGEAWDSSYIYDEPSGVSSIVDPIDYIARQPQNFFCKQEIEADNLNFLHSDNFVQLPQLESPSLPLVKRPSFMSLISENNEDEEQIRGCNNMEKVTDWRALDKFVASQLSQEDRYDGEGVSNFGAHRNSDMSLLLLQSSREEGNKLNGFMSSGSDCDFGICIFDK* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00382 330 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Eupl13g00382 330 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
Eupl13g00382 330 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
Eupl13g00382 330 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 236 - -
Eupl13g00382 330 FunFam NAC domain-containing protein 17 161 - -
Eupl13g00382 330 ProSiteProfiles NAC domain profile. 8 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00382 Eupl-Chr13 5278410 5284425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00382 1 329 NAC Transcription Factor Family AT2G18060 64.770 3.17e-161 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl13g00382 NAM 1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00382 - - nnu:104607494 595.119