Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00378 ATGCCACAACCACCACCACCACCACCACCACCCTCCATGACGATGAATTCTATTCTGCTCTTTCTTCTCGTGATTCTCTCCACCATCTTCTTATCCTGCGCCCAACGCAGCGCCGAAACCCTATCTGAGATCCAGGCTCTCACATCCTTTAAGCTCAATCTTCATGATCCCCTAAGCGCATTGAACGGCTGGGATTCTTCGACACCATCTGCCCCCTGCGACTGGCGAGGAATAGTTTGCTACAACGGCCACGTTCGGGAACTCCGCCTACCTCGTCTCCAACTTCGCGGCCGACTCACGGACCATCTCGCTAACTTACGCGAGCTGCGTAAGCTTAGCCTACGCTCGAACGCCTTAAACGGCACCATTCCTTCTTCTCTCTCCAAATGCTCTCGTCTTCGTTCCGTGTTTTTACAGGACAACTCATTTTCCGGCCATCTACCGCCGGAGATCTCCAACCTCACTGATCTCCAAGTCCTCAACGTAGCTCAGAATCTCCTCTCCGGCGTAATCTCCGGCGATCTTCCTGAGAATCTCCGTTACCTCGATCTGTCCTCGAACGAGTTCTCCGGCGAGATCCCGCGGAACTTCTCTTCCACGTCTCGGCTCCAGTTCATCAACCTGTCGTTCAATCGGTTCACCGGAGAGATACCAGCGAGCTTCGGGGTGCTTCAACAGCTTCGGTACCTGTGGTTGGATTGGAATCTATTGGAGGGAACTCTGCCTTCGGCGCTCGCGAATTGTTCTTCGCTCCTGCATTTGAGCGTTCAAGGCAATGCGCTTCGAGGTTTGATTCCAGCGGCGATTGGAGAGCTTCCGAGCCTTCAAGTGCTTTCGCTTTCACATAATAACCTATCTGGTTCGGTTCCTTCATCTATGTTCTGCAGTGTTTCTATTAATCCTCCGTCGTTGAGAATCGTACAGCTAGGGTTTAATGCGTTCACGGATCTTCTTCCACCGGCAAAAGCTACTTTTTCTAGTGTTTTGCAGGTTGTGGATCTTCAGGAGAATCGAATACGCGGCGTGTTTCCATTGTGGTTCACGAATGTGTCAACACTGGAAGTGTTGGATCTTTCAGCGAACTTGTTCTCTGGTACATTACCGATTGAGATCGGAAACCTCTTGTTGCTGAAGGAGCTGAGAGTGGCGAATAATTCGATGAACGGTGATCTTCCGGCCGAGATTCAGAAGTGTAGTTTGTTACGTGTTCTTGATCTTGAAGGGAATCTGTTTTCTGGTGAGCTTCCTGCATTCTTGGGGGAAGTAAGGAGTTTGAAGATGATGTCTCTTGGGGGAAATCGTTTCTCCGGGCAGATTCCAGTGAGTTTCAGAAATCTTTCCGAGTTGGAAATGCTGAATCTGAGACAGAACAAGCTGATCGGGAACATGCCGGAAGAGCTACTTCAATTGAGCAATTTGACTACTTTGGACCTCAGTGGCAACAAGTTTTCTGGTGAAGTTCTGTCGAATATCGGGGATTTAAGAGGGCTACTGGTTCTCAACATGAGCAATTGTGGATTTTCAGGGAGGATCCCTTTGAGCATTGGAAATCTGTTGGGCCTCACCACGCTGGATTTGAGCAGGCAGAATCTCTCTGGTGAGGTACCATTTGAGCTTTCAGGGTTGCCAAATCTGCAACTTCTCTCTCTGGGAGAGAACATGTTCTCTGGAGATGTTCCCGAAGGTTTCAGCAGCTTAGCGAGTTTACAATATCTGAATCTGAGTTCCAATGCCTTCACCGGTAAAATTCCAGCAACATACGGCTTTCTCAGGTCATTACTTGTTCTGTCCCTAACCAGCAATCACATTTCCGGCATGATTCCAGCAGAGCTTGGCAACTGTTCGGATCTAGAAGTCCTTCAGCTCCGCTCAAATAGCCTGACCGGTAGCATTCTCACTGATCTCTCTCGTCTTTCCCATTTGACGGAGCTGGACCTGGGTCAGAATAATTTCACTAGCGAAATCCCAGAGGAAATTTCTAAATGCTCGGCTCTTTCTTCTCTATTATTGGACGGGAATCACCTTTCAGGCGTCATACCGGACTCACTGTGGAAACTATCAAACCTAACAATGCTAGATCTCTCTGCAAACAACTTGACTGGGGTGATTCCGGAAAATCTGACCAACATATCTGGTTTGAGGTACTTAAATGTGTCACAAAATAACCTTGAAGGTAAGATTCCCGCAATGCTGGGTTCCCGATTCAATGATCCTTCTCTGTTTGAGATGAATCAAAACCTATGCGGGAAGCCATTGGTCAAGAATTGTGAGAATGAAACTGAGGATAACGGCAAGAAGAGGAGAAATCTGATTTTATTGATAGGTGTTGCAGCGGCTGGAGCTTGCCTTGTTTCATTGTGTTGTTGTTGGTATGTTTTCAGCCTCTTGGGATGGTACAGACGGCTTCGAGAAGCTGAAGCAGGGGAGAAGAAAAGGAGCCCAGCACATTTGAGTTTGGGAGCAGAGGTGGGTCGTAGCAGTGGAGAGAACGGACGCCCAAAGCTTGTAATGCTCAATGGCAAGATTACATATGCAGAGACGGTTGAGGCCACAAGGCAGTTCGACGAAGAGAATGTGCTAAGCAGGGGACGGTATGGGCTGGTGTTCAAGGCTTGCTTCAAAGACGGTACAGTGCTATCAATCCGCCGCCTACCGGATGGATCAGTCGAGGAGGGGACTTTCCGGAAGGAGGCTGAATCACTCGGAAAGGTTAAGCACCGAAACATAACAGTCCTCCGTGGCTACTACATCGGTCCGCCTGATGTTCGGCTCCTTGTTTATGACTACATGCCCAATGGCAACCTTGCTAGTCTCCTACAAGAGGCGTCTCACCAGGACGGCCATGTGCTCAATTGGCCTATGCGCCATCTCATTGCTCTTGGGGTTGCCCGTGGGCTAGCCTTCCTGCACACAACCTCCATGGTCCATGGCGACGTCAAGCCACAAAACGTTCTCTTCGACGCTGATTTTGAAGCCCACCTTTCCGATTTTGGGCTTGACCGTCTAACAGTAGCAACCCCAGGTGAAACATCCACGTCTTCTACCCCAGTTGGGTCCCTTGGCTATGTATCCCCGGAGGCAGCATTAACATGTCAAGCTACAAACGAAGCTGATGTTTACAGTTTCGGAATCCTGTTGCTAGAGCTATTAACAGGTAGGAGGCCAGTGATGTTCACCAAGGATGAGGAGGACATAGTGAAGTGGGTGAAGAGGCAACTGCAGAGGGGTCAGATATCGGAATTGCTCGAGCCAGGATTGCTTGAGCTCGACCCCGAGTCATCTGAATGGGAAGAGTTCTTGCTAGGTGTGAAGGTTGGACTACTATGCACAGCACCTGACCCACTTGACCGACCTTCGATGGTTGATGTTGTCTTTATGCTCGAAGGTTGCCGTGTTGGACCTGACATTCCCTCCTCCGCCGATCCTACTTCTCAACCTTCTCCGGCATAA 3450 0.4948 MPQPPPPPPPPSMTMNSILLFLLVILSTIFLSCAQRSAETLSEIQALTSFKLNLHDPLSALNGWDSSTPSAPCDWRGIVCYNGHVRELRLPRLQLRGRLTDHLANLRELRKLSLRSNALNGTIPSSLSKCSRLRSVFLQDNSFSGHLPPEISNLTDLQVLNVAQNLLSGVISGDLPENLRYLDLSSNEFSGEIPRNFSSTSRLQFINLSFNRFTGEIPASFGVLQQLRYLWLDWNLLEGTLPSALANCSSLLHLSVQGNALRGLIPAAIGELPSLQVLSLSHNNLSGSVPSSMFCSVSINPPSLRIVQLGFNAFTDLLPPAKATFSSVLQVVDLQENRIRGVFPLWFTNVSTLEVLDLSANLFSGTLPIEIGNLLLLKELRVANNSMNGDLPAEIQKCSLLRVLDLEGNLFSGELPAFLGEVRSLKMMSLGGNRFSGQIPVSFRNLSELEMLNLRQNKLIGNMPEELLQLSNLTTLDLSGNKFSGEVLSNIGDLRGLLVLNMSNCGFSGRIPLSIGNLLGLTTLDLSRQNLSGEVPFELSGLPNLQLLSLGENMFSGDVPEGFSSLASLQYLNLSSNAFTGKIPATYGFLRSLLVLSLTSNHISGMIPAELGNCSDLEVLQLRSNSLTGSILTDLSRLSHLTELDLGQNNFTSEIPEEISKCSALSSLLLDGNHLSGVIPDSLWKLSNLTMLDLSANNLTGVIPENLTNISGLRYLNVSQNNLEGKIPAMLGSRFNDPSLFEMNQNLCGKPLVKNCENETEDNGKKRRNLILLIGVAAAGACLVSLCCCWYVFSLLGWYRRLREAEAGEKKRSPAHLSLGAEVGRSSGENGRPKLVMLNGKITYAETVEATRQFDEENVLSRGRYGLVFKACFKDGTVLSIRRLPDGSVEEGTFRKEAESLGKVKHRNITVLRGYYIGPPDVRLLVYDYMPNGNLASLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTTSMVHGDVKPQNVLFDADFEAHLSDFGLDRLTVATPGETSTSSTPVGSLGYVSPEAALTCQATNEADVYSFGILLLELLTGRRPVMFTKDEEDIVKWVKRQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMVDVVFMLEGCRVGPDIPSSADPTSQPSPA* 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00378 1149 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 930 1135 - -
Eupl13g00378 1149 FunFam Putative LRR receptor-like serine/threonine-protein kinase 820 929 - -
Eupl13g00378 1149 Pfam Leucine Rich repeat 639 654 IPR001611 GO:0005515
Eupl13g00378 1149 SUPERFAMILY Protein kinase-like (PK-like) 832 1137 IPR011009 -
Eupl13g00378 1149 ProSiteProfiles Protein kinase domain profile. 854 1136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00378 1149 SUPERFAMILY L domain-like 512 751 - -
Eupl13g00378 1149 SMART LRR_typ_2 106 130 IPR003591 -
Eupl13g00378 1149 SMART LRR_typ_2 686 709 IPR003591 -
Eupl13g00378 1149 SMART LRR_typ_2 350 374 IPR003591 -
Eupl13g00378 1149 SMART LRR_typ_2 446 470 IPR003591 -
Eupl13g00378 1149 SMART LRR_typ_2 638 662 IPR003591 -
Eupl13g00378 1149 SMART LRR_typ_2 566 589 IPR003591 -
Eupl13g00378 1149 SMART LRR_typ_2 542 565 IPR003591 -
Eupl13g00378 1149 SMART LRR_typ_2 224 247 IPR003591 -
Eupl13g00378 1149 SMART LRR_typ_2 272 296 IPR003591 -
Eupl13g00378 1149 SMART LRR_typ_2 590 614 IPR003591 -
Eupl13g00378 1149 Pfam Leucine rich repeat N-terminal domain 42 80 IPR013210 -
Eupl13g00378 1149 Pfam Protein kinase domain 856 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00378 1149 Pfam Leucine Rich Repeat 202 224 IPR001611 GO:0005515
Eupl13g00378 1149 Pfam Leucine Rich Repeat 178 198 IPR001611 GO:0005515
Eupl13g00378 1149 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 40 199 - -
Eupl13g00378 1149 SUPERFAMILY L domain-like 316 593 - -
Eupl13g00378 1149 Gene3D Phosphorylase Kinase; domain 1 826 929 - -
Eupl13g00378 1149 SUPERFAMILY L domain-like 40 346 - -
Eupl13g00378 1149 SMART serkin_6 854 1126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00378 1149 SMART LRR_sd22_2 470 493 - -
Eupl13g00378 1149 SMART LRR_sd22_2 638 661 - -
Eupl13g00378 1149 SMART LRR_sd22_2 446 465 - -
Eupl13g00378 1149 SMART LRR_sd22_2 106 129 - -
Eupl13g00378 1149 SMART LRR_sd22_2 224 250 - -
Eupl13g00378 1149 SMART LRR_sd22_2 686 712 - -
Eupl13g00378 1149 Gene3D Ribonuclease Inhibitor 176 297 IPR032675 -
Eupl13g00378 1149 Gene3D Ribonuclease Inhibitor 40 175 IPR032675 -
Eupl13g00378 1149 FunFam Leucine-rich repeat receptor protein kinase EMS1 217 321 - -
Eupl13g00378 1149 ProSitePatterns Serine/Threonine protein kinases active-site signature. 974 986 IPR008271 GO:0004672|GO:0006468
Eupl13g00378 1149 FunFam Piriformospora indica-insensitive protein 2 368 465 - -
Eupl13g00378 1149 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 498 1128 - -
Eupl13g00378 1149 Gene3D Transferase(Phosphotransferase) domain 1 930 1135 - -
Eupl13g00378 1149 ProSiteProfiles Leucine-rich repeat profile. 274 296 IPR001611 GO:0005515
Eupl13g00378 1149 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 478 760 - -
Eupl13g00378 1149 Gene3D Ribonuclease Inhibitor 298 490 IPR032675 -
Eupl13g00378 1149 Pfam Leucine rich repeat 521 578 IPR001611 GO:0005515
Eupl13g00378 1149 Pfam Leucine rich repeat 226 285 IPR001611 GO:0005515
Eupl13g00378 1149 Pfam Leucine rich repeat 423 483 IPR001611 GO:0005515
Eupl13g00378 1149 Pfam Leucine rich repeat 664 723 IPR001611 GO:0005515
Eupl13g00378 1149 Gene3D Ribonuclease Inhibitor 491 765 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00378 Eupl-Chr13 5185992 5190663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00378 13 1149 Receptor kinase-like Gene Family AT4G36180 64.716 0.0 1402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Eupl13g00378 Pkinase 1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00378 - - nnu:104599991 1743.78