Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00344 ATGGCTGGGTTCTCACTAGGTGGGGGAAACCAGCAACACCCATCAAACGAAATCCCTCCAGAAAGCTTATTTCTTTACAGAAACGAAGAGATCTCCTCATACAACAAGGGTTTCGAGCTATGGCAACAGCAACATCAACATCAACATCAACGGCACCACCCACAAGAAGATATCTACTCCTCCGCCTTAGCGGTGGGTCCGACTCCTAATCGAAGCATCAACGTCTCAGATGAGTCGTCATCGAGAGCGATAACTATGATGACCAGGCAAGGAGGAGGTGGTGGGATAAGTTGCCAAGACTGTGGTAACCAAGCGAAGAAGGACTGCATCCATATGAGGTGCAGAACTTGCTGTAAGAGCCGAGGGTTTCAGTGCCCGACTCACGTCAAGAGCACTTGGGTCCCTGCTTCTAGAAGACGAGAGCGGCAGCAACAGCTCGCTGCTATTCAACAACAGCAGCAGCAACAGCAGCTCCGAGGAGAGAATCCCAAAAGGCAGAGAGAGAATCCCACTGCTCCCTCTCTTGCCTGCACTCGCTTACCGACCACCACGTCAGGGTTAGAAGTTGGCAACTTTCCCTCCGAAGTGAATGCTCAGGCCGTTTTTCGTTGTGTTCGAGTAAGCGGCATGGATGGCCCGGAAGAGCGCTATGCGTATCAGACGGCTGTGAACATTGGAGGGCACGTCTTCAGGGGCATTCTTTATGATAAAGGTCCTGAGAGTCATTACGGTCCTGGCGAGAGCTCATCTGGTGGTGGTGGAGGAGAAGCTCACCGTAATTTCATCACGGCTGGCGCAACCACCACCACCACCACTTTATCTAGTACAGCAGCTGCTTCGGCCGCTGCCGCATTGCTTGATCCTTCCTCTATGTACCCAACACCCCTCAATGCTTTCATGGCGGGTACGCAATTCTTCCCACACCCAAGATCTTAA 936 0.5224 MAGFSLGGGNQQHPSNEIPPESLFLYRNEEISSYNKGFELWQQQHQHQHQRHHPQEDIYSSALAVGPTPNRSINVSDESSSRAITMMTRQGGGGGISCQDCGNQAKKDCIHMRCRTCCKSRGFQCPTHVKSTWVPASRRRERQQQLAAIQQQQQQQQLRGENPKRQRENPTAPSLACTRLPTTTSGLEVGNFPSEVNAQAVFRCVRVSGMDGPEERYAYQTAVNIGGHVFRGILYDKGPESHYGPGESSSGGGGGEAHRNFITAGATTTTTTLSSTAAASAAAALLDPSSMYPTPLNAFMAGTQFFPHPRS* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00344 311 Pfam Domain of unknown function (DUF702) 95 240 - -
Eupl13g00344 311 NCBIfam putative zinc finger domain, LRP1 type 97 139 IPR006510 -
Eupl13g00344 311 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 10 297 IPR007818 GO:0003700|GO:0006355
Eupl13g00344 311 MobiDBLite consensus disorder prediction 151 179 - -
Eupl13g00344 311 NCBIfam LRP1 C-terminal domain 192 239 IPR006511 -
Eupl13g00344 311 MobiDBLite consensus disorder prediction 240 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00344 Eupl-Chr13 4656457 4658853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00344 38 311 C2H2 Transcription Factor Family AT3G51060 55.410 7.72e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Eupl13g00344 DUF702 4.9e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00344 - - nnu:104607552 391.734