Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00342 ATGGAGGAGGGCGGGTGCTGTCCGTCGATGGATTTGTTCCGATCGGAGCCGATGCAACTGGTGCAGCTGATCATTCCAATTGAGTCTTCCCATCAGACCATTAAGAACCTCGGAGACCTCGGCCTCATCCAATTCAAAGATCTCAATGCAGAAAAGAGCCCCTTCCAGCGGACATATGCTACTCAGATTAAAAGATGTGGAGAGATGGCACGGAAGCTACGCTTTTTCAGGGGACAAATCGCAAAGGCAGGTTTTTCACCTTCAACAATGCCTATGACACGAGTTCATGTTGATCTTGATGACTTGGAGATAAAACTCGGAGAACTTGAAGCTGAGCTGATAGAAATTAATGCAAACAGTGAAAAGTTGCAACGTGCTCATAGTGAGCTTTTAGAATATAAGCTTGTTCTGCAGAAGGCTGCTGCGTTTTTTTACTCAGCTCAAAGTAATGCTACAGCTCAGCAGAGAGAAATTGAAGAACGTCATGTTGGTGAAGGATCCATCGACAGTCCTTTATTATTGGAGCCAGATATGTCGATAGATCCCTCAAAGCAAGTTAAACTGGGTTTTGTCAGTGGTCTTATACCCAGAGACAAGTCCATGGCATTTGAAAGGATTCTATTTCGTGCTACCAGGGGTAACGTGTTTCTCAAGCAAGATGTGGTTGATGATCCTGTCACTGATCCAGTGTCAGGGGAGAAGGTTGAGAAAAATGTATTTGTGGTCTTCTATTCTGGAGAAAGAGCAAAGACCAAAGTTCTAAAGATATGCGAAGCTTTTGGGGCAAATCGTTACCCGTTTATAGATGACCTGGGCAAGCAAGCACAGATGATAACAGAGGTTTCTGGAAGACTTTCAGAGTTGAAGACCACTATAGATGTTGGACTGATGCACCGGGACAATCTGTTGAAGACTATTGGCTACCAGTTTGAGCAGTGGAATCTTTTGGTGAGGACGGAGAAATCCATTTACAACACTCTAAATATGCTTAGCATTGACGTGTCAAAAAAGTGTCTTGTGGCAGAGGGGTGGAGCCCTGTTTTTGCGACAAACCAGATTCAGGATGCATTGCAGCGGGCAACCTTTGACAGCAACTCACAAGTTGGAGCCATATTCCAGGTTTTGCACACAAAGGAATCACCACCTACATATTTTCAGACAAACAAATTTACTTCTGCTTTTCAAGAGATTGTTGATGCATATGGTGTGGCTAAGTATCAAGAAGCAAACCCTGGTGCATACACTGTTATTACATTCCCATTTCTGTTTGCAGTCATGTTTGGTGATTGGGGCCATGGTATATGCTTGTTACTTGCGACAATGTTATTTATAATCAGAGAAAAGAAACTTTCCAATCAGAAGCTTGGAGACATGACAGAAATGGCTTTTGGCGGCCGTTATGTTATTCTGATGATGGCGCTGTTCTCAATTTACACTGGACTGATCTATAATGAGTTCTTTTCAGTCCCATTTGAACTTTTTGGCCACTCTGCCTATGCATGCCGTGATCTTTCCTGCAGGGATGCTACTACAGTGGGCTTAATTAAAGTGCGCCAGACTTATCCATTTGGTGTGGATCCTAAGTGGCATGGTTCCCGCAGTGAGTTGCCCTTCCTTAACTCGTTGAAGATGAAGATGTCAATTCTTCTTGGGGTAGCCCAAATGAATCTTGGAATTGTGTTGAGTTATTTCAATGCTAAGTTCTTTAGAAATAGCCTGAATACATGGTTCCAATTTGTTCCCCAGATGATATTTTTAAACAGCCTGTTTGGCTACCTTTCCCTCCTCATCATTGTGAAATGGTGCACTGGTTCAAAATCTGATCTATACCATGTAATGATATATATGTTCCTGAGTCCAACTGATGATCTGGGCGAGAACCAGCTTTTCATTGGTCAGAAAACCCTTCAGATTGTGTTACTATTGTTGGCTCTTGTTGCTGTACCGTGGATGCTGTTTCCAAAGCCTTTTCTTTTGAAGAAACAACACCAAGAGAGGCATCAAGGTCAATCCTACCAACTGCTTCACAGTGCTGATGACTCTTTCGAAGTGGAGGCGAATCATGAATCCCATGGCCATGAGGAATTTGAATTTAGTGAAGTTTTTGTACACCAACTCATACATACTATAGAATTTGTCCTTGAGCAGTCTCAAATACAGCTTCATATCTTCGGTTGTGGGCCCTCAGTCTTGCCCATTCAGAGTTGTCAAGTGTATTCTATGAGAAGGTTCTACTACTTGCTTGGGGGTTCAACAACGTCATAA 2265 0.4287 MEEGGCCPSMDLFRSEPMQLVQLIIPIESSHQTIKNLGDLGLIQFKDLNAEKSPFQRTYATQIKRCGEMARKLRFFRGQIAKAGFSPSTMPMTRVHVDLDDLEIKLGELEAELIEINANSEKLQRAHSELLEYKLVLQKAAAFFYSAQSNATAQQREIEERHVGEGSIDSPLLLEPDMSIDPSKQVKLGFVSGLIPRDKSMAFERILFRATRGNVFLKQDVVDDPVTDPVSGEKVEKNVFVVFYSGERAKTKVLKICEAFGANRYPFIDDLGKQAQMITEVSGRLSELKTTIDVGLMHRDNLLKTIGYQFEQWNLLVRTEKSIYNTLNMLSIDVSKKCLVAEGWSPVFATNQIQDALQRATFDSNSQVGAIFQVLHTKESPPTYFQTNKFTSAFQEIVDAYGVAKYQEANPGAYTVITFPFLFAVMFGDWGHGICLLLATMLFIIREKKLSNQKLGDMTEMAFGGRYVILMMALFSIYTGLIYNEFFSVPFELFGHSAYACRDLSCRDATTVGLIKVRQTYPFGVDPKWHGSRSELPFLNSLKMKMSILLGVAQMNLGIVLSYFNAKFFRNSLNTWFQFVPQMIFLNSLFGYLSLLIIVKWCTGSKSDLYHVMIYMFLSPTDDLGENQLFIGQKTLQIVLLLLALVAVPWMLFPKPFLLKKQHQERHQGQSYQLLHSADDSFEVEANHESHGHEEFEFSEVFVHQLIHTIEFVLEQSQIQLHIFGCGPSVLPIQSCQVYSMRRFYYLLGGSTTS* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00342 754 PANTHER VACUOLAR PROTON ATPASES 12 715 IPR002490 GO:0033179|GO:0046961|GO:1902600
Eupl13g00342 754 Pfam V-type ATPase 116kDa subunit family 36 715 IPR002490 GO:0033179|GO:0046961|GO:1902600
Eupl13g00342 754 Coils Coil 92 126 - -
Eupl13g00342 754 PIRSF ATP6V0A1 8 717 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00342 Eupl-Chr13 4593450 4617255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00342 10 714 Primary Pumps ATPases(2) AT4G39080 76.062 0.0 1118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00342 K02154 - nnu:104607555 1211.82