Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00305 ATGATTTTTGATTTGGATCCATTTGGCGATATTCTTCCTGTGCCAACCGGCGGTATTGCTCGAGCTGGGGCAAAGTTCCAACCCAAGGCCAAATGCCGGCCCAGAAAGGAAAAACCCTCCATTGTACCAGACACAACACAAATTTGTATAGATACATCCAGTATAAGGCCGTGCAGTACCACACTCGCAGATCCTTCATCCAAACTTCTTGAGACTCAAGAGCTGGTTAACAGCACTGAGGTTTCACATCCAGGAGTTCCCCCGTCTGATGGCAATGAAAATTCTGTGCCGGAGGATGCTTCGCCCCAGCTCGTCACGACCAAAGACAATTCGAGCTCCATGGATAATCTGCATTCTGAAGTTGCAATCTCCAACAGTCATGGAGAATTGCAGTTTGCTTTTGGAAGATCAAGAGGAGAGATTGTGAATATTTCTTCTGAGTTGGAATCTCTTGACGATATTCTTCCTCAGCCCACTACTGCAAATGTGTGTACTGTGAGAAAGTTCAAGCCTAAGGTCCAAGTGAATGCCCAATCTAGAAACAAGATTTCAACTTCAGGTCCTGTTACCACTGATGCAGATGTTTCCATTTCTCATCCTGAGGCTCTTATTCTCCATGATTCTATTACTAAGGACTTGGAGGAAGGACCTACCCTTCCTGTCCTTACTTCTGTCAACTCCCCAACCTTCGGGGCCTGTAGCTCTGCACCATCTGACTCTTCACCGGAACTTCTTGTGTTCCAACAGCCAGTAAAAAGCGTGGAAGCTGCATGCTCTGATAGCAATGGAAATTTGCAGATGGATAATGGAAGAAAAGAAGTAAAGATTTGTATTTTCTATACCATTTATATACATTTATATTTTTCTTGGAGTAGATTGGCAGCAATTTTGTTTGCTTTCAGGAAGCAGAGGCATTTCCTGGCTCGGAGTCTTTTGATATTATTTCTCAAACCACCACTACCAACTGTAACTAGCAAAAATCTACCACCTGCAATCTTTCTTATACTTCTATTTTGCTATTTTGCGTTGGGAATTCATTTTGGTGGCAGTTCGGGGAGCTGGGATGCTCAGTTGATTCCTTCTGAAAATGAATACTTGGATGAGGATTCGGATCCTGCATTTCCATCTGACGGTTTTCTTGATTTCTTAACGATGAGGCTCTGTTATTCTGCATCCACAGACCCTCCCTCTGAACTTTCAGTCATTGAAGAGCTGACACACCTTGCTGATTCTACTATCTCAGATTCTGTTCCTGGAGAAATTGTGGATTCACAAGATTTTCCTGTAATGTCAAGAAGGGAGGGTACTAAGAGTAGGAAAGGAGAAACTTCTACAGTATCAGAAGACACAGTGAGAAAGGTGCGTTCCAGTGTTGAAGAATTTTCTTTAACAGCCCAGGATGAAAGACCCATATTAGCAGCCATTGAGGAGAATGTAGCTGGTAACTCATCAAGGCAGCTGAGAAAGAGGTTAATTGCTCATGTTCTTGCCGACGAGATAGAAAATAGGAGTCAAGAAAACGGGGACCTGCTTGCCGACCCCTCTGACAATTCTCTGATGGATGAAGATGACAATAATGATGATGATGGTGATGAATATAGAGGGGAAGATACATCTCACTGTAAGAGGGCACCAAGAAGATCCAAGAGACTTGCAGTTGAAAATGAGAAAACAGTTCGAAGAGGTAAAAAAGCTTCTGAAGCTGTGGATCCATTAAACCAGGAACCTCGCAAAAAGAAATTCTCCCATTCTACTCGACGAAACAAAAGACGAGTGGACAAGGTTTTGCTTGAAACCCCAGAGGAGGAAATTAACCCCAGAAAGCTGATTATGAAGGATCTAATTCTGCTTGCAGAGGCCAAGGAACGGATATTGAATAAAGAGGCAGCAGCATCTAAGGAGTCAATTCCCAGTCAAAGTGGTAATAATTCATTTGCTCAGGATGCCCTTTATGATGAAGAGGACGCCTTCGCTCCAATGCAAGGTCTAAACCCTGATGATGATCCAGCAACTCCGAAGGTTCAACCAAGTTCCTCTAAACTGAATTACCAGTCCTACATGGATAGGACACCAACAGAAAGATGGTCGAAACAAGATACAGAATTGTTCTATAAGGCTATTCGGCAGTTCGGGACTGATTTTGCAATGATACAACAACTATTCCCTGGTCGAACACGTCATCAAGTGAAATTGAAATATAAGAAGGAAGAACGCCAACATCCTTTGATGCTTTATGATGCCTTAACAAATCGTTCCAAAGATCATTCCCATTTTGAACTGGTGATTGAACGGCTACAACAAGCTGCTGCACAGGCAGAGGAAAATCCCAACAGAGAAGAGTCGTTTGACATGACAGGCGAGGAGGAGGTCACTCCCGAAATGAATGAGGAAGTAGGGAAATCTGAGCGAAAGAGGGATGAAGAAGTAGCTAAAGATTTGGAATCACAGGTACCTGAAGTTCAGAGTCCTGTGAAGTCTCATGACAGTGAAGATGATATGTATAGATGGAGTCAATATAAAAGTGATTATGACATATTCTGA 2541 0.4294 MIFDLDPFGDILPVPTGGIARAGAKFQPKAKCRPRKEKPSIVPDTTQICIDTSSIRPCSTTLADPSSKLLETQELVNSTEVSHPGVPPSDGNENSVPEDASPQLVTTKDNSSSMDNLHSEVAISNSHGELQFAFGRSRGEIVNISSELESLDDILPQPTTANVCTVRKFKPKVQVNAQSRNKISTSGPVTTDADVSISHPEALILHDSITKDLEEGPTLPVLTSVNSPTFGACSSAPSDSSPELLVFQQPVKSVEAACSDSNGNLQMDNGRKEVKICIFYTIYIHLYFSWSRLAAILFAFRKQRHFLARSLLILFLKPPLPTVTSKNLPPAIFLILLFCYFALGIHFGGSSGSWDAQLIPSENEYLDEDSDPAFPSDGFLDFLTMRLCYSASTDPPSELSVIEELTHLADSTISDSVPGEIVDSQDFPVMSRREGTKSRKGETSTVSEDTVRKVRSSVEEFSLTAQDERPILAAIEENVAGNSSRQLRKRLIAHVLADEIENRSQENGDLLADPSDNSLMDEDDNNDDDGDEYRGEDTSHCKRAPRRSKRLAVENEKTVRRGKKASEAVDPLNQEPRKKKFSHSTRRNKRRVDKVLLETPEEEINPRKLIMKDLILLAEAKERILNKEAAASKESIPSQSGNNSFAQDALYDEEDAFAPMQGLNPDDDPATPKVQPSSSKLNYQSYMDRTPTERWSKQDTELFYKAIRQFGTDFAMIQQLFPGRTRHQVKLKYKKEERQHPLMLYDALTNRSKDHSHFELVIERLQQAAAQAEENPNREESFDMTGEEEVTPEMNEEVGKSERKRDEEVAKDLESQVPEVQSPVKSHDSEDDMYRWSQYKSDYDIF* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00305 846 MobiDBLite consensus disorder prediction 793 814 - -
Eupl13g00305 846 CDD SANT 694 735 IPR001005 -
Eupl13g00305 846 MobiDBLite consensus disorder prediction 771 833 - -
Eupl13g00305 846 MobiDBLite consensus disorder prediction 516 532 - -
Eupl13g00305 846 Pfam Myb DNA-binding like 685 769 IPR039467 -
Eupl13g00305 846 Gene3D - 695 758 - -
Eupl13g00305 846 MobiDBLite consensus disorder prediction 658 679 - -
Eupl13g00305 846 MobiDBLite consensus disorder prediction 76 115 - -
Eupl13g00305 846 MobiDBLite consensus disorder prediction 504 588 - -
Eupl13g00305 846 SUPERFAMILY Homeodomain-like 693 742 IPR009057 -
Eupl13g00305 846 Coils Coil 755 775 - -
Eupl13g00305 846 MobiDBLite consensus disorder prediction 431 451 - -
Eupl13g00305 846 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 356 843 - -
Eupl13g00305 846 SMART sant 691 739 IPR001005 -
Eupl13g00305 846 MobiDBLite consensus disorder prediction 533 579 - -
Eupl13g00305 846 ProSiteProfiles SANT domain profile. 690 738 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00305 Eupl-Chr13 4150130 4162825 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl13g00305 Myb_DNA-bind_7 2.2e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00305 K15198 - ming:122077031 571.237