Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00304 ATGGAGTCTGCAAATCTCTATCACCAGCATCAGCTCCAAGAACAGCTTGTTGGGTCTTCTTCCTTAGCAACCCAACCTTTCTCTGGTGTTAGCAACAACAATGCTTGGAACTCAAATCTTATGTTGAATTCTGGGAACTTCAGTCCAAATATCAATGGAGTTCTCTCAAACTCGAGGGATTTACGGCAAACCAGTGACATTCCACTCCCTCCTCTCAACACTTCCATGATTCAAGACTTAGGTTTTCATTCTGCTAGTAATGCAGGTAGCTTCACCAGTCAGTTAGCCCATGAACTGCACCTTGCAAAAATCAAACAGGAGTTATCAGATTCTTACCCCAAATGTAGTGAAACAATTAACGGCCCATCTAATCTAGAAGATTTCCATTTCCCTTCCACAAGCTACATCAAACATGAGCAACGAGATTTCCAGCATTTAAGTGATGAAAAGGTCAGCTTGCTCAAAACCTTCTCTTCTGGTTGCCAACTTAACGAACTTCAACTTTCAGCTGGAGAATTATACTCCAATTCTCAAAGTTACCCTAGTTTTGGAGGTGTAGCTACATCTAGCAGAGGGAACTTCAGCCAGATTTTTCCAAGTACTAATATTCCAAACCTCAATCAACCTTCTTCGCCGTTTTCAAGCTCCTTAGGTATGAATTTGCAAGTTTTGGATCTGCTAACCTCTACAAAATTTGGTGGGAGTTTTACCCAACCTTCACATAATAATCTTGGCCTATTCAAAGAAAGTTTATCTTTTGGTCTTGACCATCTGCAAGAATCAAGTCACAAGCCATCATACAGCTTTAATAAAATATCATCTTTCATGAATGGAGTTACAGAAACAAAGAGAGCTAGCAGTACATCGGAGCCGAAGGCATCTCATGCGGCAACGAAGAAGCCTCGAATCGAGTCGCGATCGTCTTTCCCTCCTTTCAAGGTTAGGAAAGAGAAATTAGGAGACAGAATTGCAGCTCTCCAACAATTGGTGGCACCATTTGGCAAGACCGACACGGCATCCGTACTAACGGAGGCCGTTGGATACATCAAATTCCTCCAAGATCAGGTTGAGACACTAAGCGTGCCTTATATGAAGTCATCACGCAACAATACTCGTAGAACTATTCAAGGGGGTTCAAGCGAGGAGGAGAGAGGCGAAGAACCGAAGCGAGATCTCAGAAGTAGAGGGCTCTGCCTTGTGCCATTGTCATGCACTTCCTACTTTACCAACGACAATGGAGGTGTTTGGCCACCCCCTAACTTTGGTGGAGGAACTTGA 1278 0.4335 MESANLYHQHQLQEQLVGSSSLATQPFSGVSNNNAWNSNLMLNSGNFSPNINGVLSNSRDLRQTSDIPLPPLNTSMIQDLGFHSASNAGSFTSQLAHELHLAKIKQELSDSYPKCSETINGPSNLEDFHFPSTSYIKHEQRDFQHLSDEKVSLLKTFSSGCQLNELQLSAGELYSNSQSYPSFGGVATSSRGNFSQIFPSTNIPNLNQPSSPFSSSLGMNLQVLDLLTSTKFGGSFTQPSHNNLGLFKESLSFGLDHLQESSHKPSYSFNKISSFMNGVTETKRASSTSEPKASHAATKKPRIESRSSFPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLTEAVGYIKFLQDQVETLSVPYMKSSRNNTRRTIQGGSSEEERGEEPKRDLRSRGLCLVPLSCTSYFTNDNGGVWPPPNFGGGT* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00304 425 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 313 365 IPR036638 GO:0046983
Eupl13g00304 425 MobiDBLite consensus disorder prediction 367 392 - -
Eupl13g00304 425 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 303 352 IPR011598 GO:0046983
Eupl13g00304 425 CDD bHLH_AtbHLH_like 310 360 IPR045239 -
Eupl13g00304 425 MobiDBLite consensus disorder prediction 377 392 - -
Eupl13g00304 425 Gene3D - 313 375 IPR036638 GO:0046983
Eupl13g00304 425 SMART finulus 314 358 IPR011598 GO:0046983
Eupl13g00304 425 MobiDBLite consensus disorder prediction 282 311 - -
Eupl13g00304 425 FunFam Transcription factor bHLH123 family 313 375 - -
Eupl13g00304 425 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 149 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00304 Eupl-Chr13 4136013 4142462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00304 29 425 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 43.052 4.36e-68 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00304 - - nnu:104595628 587.415