Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00274 ATGCTTGCAATGAAGAATTCGTCAAGATACAGCAAAACCTATCAATCCAATTCCTCATTCAAACAAAGGCGGAGTGGTTATGAACCTTCCGATACAGAAACTGAATGGCAAGAAAGTCCATGGCATGACCTGAATAACAATAATGGGGATGGAGCTTTAGTTGCAAACCGACCGAAAACTCCTGCAAGAAATACCAGTCCTCTAAGTTGTAACCAGAGGGACCCTTTGAAGCTTGAGTATGATCTCTCTTCTGCTGTTGGACCTTCAAAAAATTGTCCGGTTCGAAATAGTAGTAAATCTCCATGTAAACCACGAAGGGATGACAGTAACGTAGTTTCACCTAAATTGGGTTTGGATCTTCAAAGGAATACCAGTCCTCTTTCAAAGTCGGAGCGTCGGAAACATATTTCTCCATATAAAAATAGAAGAGAGGAACCAGATGTGGATAATAATGAGTTTATAAGGTCAAATAGAAGGCAAAATCATAGAGTGGCACACAAACGTCTTGAGTCAGAGGAAAACCGAGCTCATTCTCAATTTCTAGAAGCTTCCAGAGTGAGTGAGAGATCAAACTACAGCAGTAGGTCTATGTCTGCTCCAAAACCGAGAGCAAGAGTAAAGGCTCAACTGATTAATTTTGGTCCTACAGAGCAGGGAGGAGACCTGAGCCCCTCATCATTGTCAAAAAGCCTAACCCGGAAACAGAGGGAAGCTTCCGACGTGAAAGCTCCTTCAGCGAGTGAAATCAATGAAATGATTGCTAATGCGAAGCTCTCAATATGTCTCATTTCTGGTGCTCTAAAGGTGGAAAGCATAGAGTCAATTTCACAAGGCGATATATTCTTTTCTCGTGACTGCACGGCCTTGGCCTTGCAGAAGAATGTTGTAAGAAAGAACAGTGGTTTTAATGGCAAATTTACTCAAGAGGCTATTATTTCTGAAAGAAATGCTGCTTCTCATCAACGGAGCAGAGTAAGCAGTGGTTTTGATCAGAGTACCCATGTTGTTTCATCCAGTACTATTGCATCACGAACAAATACAACCTACAGTTCTGCTGTAAGAAGGCAGAGTGGTGGTAAAAGTAGAACTGAGAGTAGTAAGATGAGTGACGGTCGTGGGCATATGAATACCCATGTTGTTTCATCCACTACTATTGCATCACGAACAAATACAACCTACAGTTCTGCTGTAAGAAGGCAGAGTGGTGGTAAAAGTAGCACTGAGAGTAGTAAGATGAGTGACGATCATGGGCATATGAGTTGGAGTTCCAGGAAATTCACAGCCAATAGACAGAAGAGCCTAAAAGATACATGGTTTGGTTGTGTGAAGAAAGGGCCTTGCAGGACCTTGAAATCATCCGAAACTAGGGAGTTTGATGAAGCTTCATTTATCAAGAAGGCATTCGTGGTTGAAAACCTGCGACAGTTCTGGGCTGATAAGCATCAACCTGGCTCACTGAATCGGTTCATTTGCCACAAACAGCAAGCTCAACTTCTCAGGCAACTGATATCTTACAAAACTTGTCCGCATATTCTGTTCAAGGGGCCTTTGGGGTCAGGAAAGAAAGCACTAGCCATGGCTTTACTGCAAGAAATATATGGTGACTCAGTTTGTAATGTATCTCAGGAGTTATGGTACTTCCGTGTTCAGGAAAAGAGGCCTATGCAAGTAGCTGTTCCATTAACCTCCAGCCTTCACCATGTGGAACTTAACCTAAAGTCAGAATCAAAGAATGCAATATATGCACTAACGGCTCTAGTCAAGGAAATAACCTGCCGCCATGCAACTATTCCTGAAGTCAGCGATGCAAGAGTCGAACCAGATTACAAAGTAATAGTTCTCTATGAAGTTGACAAGCTCGAAGAGAACATTCAGCACTTTATAAAATGGGTAATGGACTGTTATACGGATACATGCAAGATCATACTCTGCTGTGAAGATGACATCGACATCCTTGATTCAGTCAAAAGCCGCTGCAAAGTTATTCCAGTTGATGCTCCTGTTACTCATGAAATCATGGAGGTTCTTATTCAAATTGCGAGGAAGGAAAACTTCAATCTGTCCATGAGCTTTGCTGCTAAGATTGCAGCCAAATCAGAGCAGAACTTGAGGAAAGCAATCATGGCACTTGAAGCATGCAAAATACACAACTATCCTTTTGTTGATGAACAACCAATTCCGCTAGGTTGGGAAGAGGTACTTGTGGAACTCGCCGCAGAGATTCTAACTGATCCATCACCCAAAAGATTATCTTTTACACGGGGTAAGTTTGAAAAACTGCTGCTGGATTTTGTTCACCCCAAACTGATTCTCCAGAAGCTTGTGGAACAGTTTCTTAAGGGAGTTGAGACTAATTTGAAACGGGAGCTTTATTACTGGCATGCTTATTATGATAAGAGGCTCCCCATGGGAACAAGTGCCATACTGAAGCTAGAAGAATTTGTGGCAAAGTTCATGGGTATCTACAGGAAGAGCTTCAGGGGTCATCGATATCCATAG 2499 0.4226 MLAMKNSSRYSKTYQSNSSFKQRRSGYEPSDTETEWQESPWHDLNNNNGDGALVANRPKTPARNTSPLSCNQRDPLKLEYDLSSAVGPSKNCPVRNSSKSPCKPRRDDSNVVSPKLGLDLQRNTSPLSKSERRKHISPYKNRREEPDVDNNEFIRSNRRQNHRVAHKRLESEENRAHSQFLEASRVSERSNYSSRSMSAPKPRARVKAQLINFGPTEQGGDLSPSSLSKSLTRKQREASDVKAPSASEINEMIANAKLSICLISGALKVESIESISQGDIFFSRDCTALALQKNVVRKNSGFNGKFTQEAIISERNAASHQRSRVSSGFDQSTHVVSSSTIASRTNTTYSSAVRRQSGGKSRTESSKMSDGRGHMNTHVVSSTTIASRTNTTYSSAVRRQSGGKSSTESSKMSDDHGHMSWSSRKFTANRQKSLKDTWFGCVKKGPCRTLKSSETREFDEASFIKKAFVVENLRQFWADKHQPGSLNRFICHKQQAQLLRQLISYKTCPHILFKGPLGSGKKALAMALLQEIYGDSVCNVSQELWYFRVQEKRPMQVAVPLTSSLHHVELNLKSESKNAIYALTALVKEITCRHATIPEVSDARVEPDYKVIVLYEVDKLEENIQHFIKWVMDCYTDTCKIILCCEDDIDILDSVKSRCKVIPVDAPVTHEIMEVLIQIARKENFNLSMSFAAKIAAKSEQNLRKAIMALEACKIHNYPFVDEQPIPLGWEEVLVELAAEILTDPSPKRLSFTRGKFEKLLLDFVHPKLILQKLVEQFLKGVETNLKRELYYWHAYYDKRLPMGTSAILKLEEFVAKFMGIYRKSFRGHRYP* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00274 832 Gene3D - 474 667 IPR027417 -
Eupl13g00274 832 Gene3D - 669 725 - -
Eupl13g00274 832 FunFam replication factor C subunit 3 668 726 - -
Eupl13g00274 832 MobiDBLite consensus disorder prediction 317 364 - -
Eupl13g00274 832 MobiDBLite consensus disorder prediction 126 179 - -
Eupl13g00274 832 MobiDBLite consensus disorder prediction 372 408 - -
Eupl13g00274 832 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 477 809 - -
Eupl13g00274 832 MobiDBLite consensus disorder prediction 1 243 - -
Eupl13g00274 832 MobiDBLite consensus disorder prediction 180 198 - -
Eupl13g00274 832 MobiDBLite consensus disorder prediction 317 422 - -
Eupl13g00274 832 SUPERFAMILY post-AAA+ oligomerization domain-like 728 822 IPR008921 GO:0003677|GO:0006260
Eupl13g00274 832 MobiDBLite consensus disorder prediction 216 232 - -
Eupl13g00274 832 Gene3D - 729 822 - -
Eupl13g00274 832 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 471 714 IPR027417 -
Eupl13g00274 832 MobiDBLite consensus disorder prediction 1 25 - -
Eupl13g00274 832 MobiDBLite consensus disorder prediction 39 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00274 Eupl-Chr13 3798637 3809200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00274 476 823 Core DNA Replication Machinery Family AT5G27740 40.571 1.47e-86 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00274 K10756 - msin:131237953 906.746