Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00268 ATGGGGATTCATCTTTTCTTGATTGCTCTAGCTTTTTTTTCTTTCATGGCTACCTCTGGTGCAGGCCCATCCGATATGTCTACAGCACTTCTCATAAAGGTCGATCAATCAGGAAATGGAGATTATAGGAAGATACAGGATGCCATTGATGCCGTGCCCTCTAACAATTCACAGTTAGTCTTCATATGGGTTAAGCCAGGAATCTACAGAGAAAAGATTGTTGTGCCAACTGATAAACCCTTCATAACGCTGAGTGGGTCAAAAGCGACAACGACGGTAATAACATGGAACGACGGTGGGGAGATATTCGAGTCACCAACACTCTCTGTATTGGCTTCTGATTTTGTAGGAAGACATCTCACAATTCAGAATACGTTTGGGCCAAGCGGAAAAGCCGTTGCGTTGAGGGTATCGGGAGATAGAGCGGCGTTCTACGGGTGCAGGATCATCTCTTATCAGGACACCCTCCTTGATGATACCGGAAGGCACTATTACAGCAACTGTTACATCGAAGGAGCAACTGACTTCATATGTGGAAATGCAGCTTCTCTCTTTGAAAAGTGCCATCTGCATTCACTTGCGGAGGGAACTGGCGCTATCACCGCACAACGCCGAGAGTCACCGGTGGAGGACACGGGCTACACCTTCTTGGGTTGCAGGATCACTGGAACGGGGACTGCGCTCTTAGGAAGACCATGGGGTACTTACTCTAGGGTGGTGTTTGCTCAAACTTTTATGACAAATGTGATATTGCCTCAGGGATGGGATGACTGGGGTGACCCCACCAAGCAAAGTACGGTGTATTATGGGCAATACAAGTGTTGGGGACCAGGGGCAAATGTCTCGCGAAGGGTTGGATGGTCACGCATTCTGTCAAACGATGAAGCTGCACCTTTCTTGACTAAGAACATGATTGGTGGCCGAGGTTGGCTCAGGCCCGTACCAACACGTTTCAAGAGAGGCTCCACAGTGATTGCTGAGAAGGTTAATTGA 993 0.4814 MGIHLFLIALAFFSFMATSGAGPSDMSTALLIKVDQSGNGDYRKIQDAIDAVPSNNSQLVFIWVKPGIYREKIVVPTDKPFITLSGSKATTTVITWNDGGEIFESPTLSVLASDFVGRHLTIQNTFGPSGKAVALRVSGDRAAFYGCRIISYQDTLLDDTGRHYYSNCYIEGATDFICGNAASLFEKCHLHSLAEGTGAITAQRRESPVEDTGYTFLGCRITGTGTALLGRPWGTYSRVVFAQTFMTNVILPQGWDDWGDPTKQSTVYYGQYKCWGPGANVSRRVGWSRILSNDEAAPFLTKNMIGGRGWLRPVPTRFKRGSTVIAEKVN* 331
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00268 330 Gene3D - 28 321 IPR012334 -
Eupl13g00268 330 SUPERFAMILY Pectin lyase-like 29 318 IPR011050 -
Eupl13g00268 330 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 20 312 - -
Eupl13g00268 330 FunFam Pectinesterase 26 315 - -
Eupl13g00268 330 Pfam Pectinesterase 33 307 IPR000070 GO:0030599|GO:0042545
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Eupl13g00268 Eupl-Chr13 3754516 3758120 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00268 22 313 Carbohydrate Esterase AT5G47500 42.071 2.10e-88 268