Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00262 ATGAACAGAGCTCTACCAGAGATGTTACACTGTCTACAAACGCCGGAAAATCTTGCCGGAAACGGTACGAACCAAACTGTGCTGGATAGACAACGAGCTAGGCTGAAATGGCAACAACAGCAACAGCAATCTCAGCAACCTCAAGAGAGCTATTTTAATGAGACCCATTTCAATCTCTTGCCTCTGCTTTCAACAACCCAACAATTTGAGGGGCTGACGAACAACGAATCCATGATCAGAGAGCTTGCGAGCCGTTCGATGAAGGCCGACCTGGCTTTGGAAAATGGGTGGCCGGATTTAGGCAAATACCCAATACCCAGAACTGGTTTTGGTGGGGAGACGGCGGACTTTGTCTCGACTGGGTTTGCTACTAATTCTCTTGAGATGGTGGATTACTCCATTTCCAGGACCTCTAGTTGTCCGCCGGTGGTGGGTGACGATATTCCGGTGGTAACTGTGGCAGAGGAGAAAGGTAGGGAGATAGGTTTGACGCAGAAAATGGCTTCGACGGTTGGGAGGGACAGCTTCAAGAAAAGAAAAGCGGATAAGGCACAAAACCCAAAGGTTGTTTTAGCAGACGACACAACACACACAAGAGACAAGAGGATGAAGGGAGACGCAGAAGAGGTGGAGTCCAAGGTCACAGAACAAAACAACAACAGCAGCAGCAACAACAACAACAATAGAGCAACCTCTGCAGATACTTCAAAAGAGAATTCAAAGGTTTCCGAGGTTCAAAAACCGGATTACATCCATGTCCGAGCGCGTCGCGGCCAGGCTACAGATAGCCACAGCTTAGCTGAAAGAGTGAGAAGGGAAAAGATAAGTGAGAGGATGAAATATCTGCAAGATTTAGTTCCTGGGTGCAACAAGATCACCGGCAAGGCCGGAATGCTCGACGAAATCATCAACTATGTTCAATCTCTTCAAAGACAAGTAGAGTTCTTGTCCATGAAACTCGCCGCTGTTAATCCGAGGCTTGACCTCAACATCGAAAATTTCTTCACAAAAGAGATGTTTCCGGCTTGCAGCACCAATTTTCCGACAGTTGGGATGTCATCGGAAATGGCCAATTCGGCCTACTTTCAGTTTAATCCAGTACAACAAGTAGTAGGGTTGGATATGGCGATAAGTCCGTCTGAAATGGCACTTCGAAGAACCACAAGTGCACCCGTATCGGTGCCCGATACATTCCTGGATACTTCATGCTTCACTCAAGCTCAACCCACTTCTTCTACCTGGGAGACTGATTTACAAAGCCTTTACAATGTGGAATTTCATCAAGGAAGACCAAATGCATTTCCACCTCAACCATTTACAGGCAGCTTGGAAGCCAACAATCTGAAGATGGAGATGTGA 1359 0.4687 MNRALPEMLHCLQTPENLAGNGTNQTVLDRQRARLKWQQQQQQSQQPQESYFNETHFNLLPLLSTTQQFEGLTNNESMIRELASRSMKADLALENGWPDLGKYPIPRTGFGGETADFVSTGFATNSLEMVDYSISRTSSCPPVVGDDIPVVTVAEEKGREIGLTQKMASTVGRDSFKKRKADKAQNPKVVLADDTTHTRDKRMKGDAEEVESKVTEQNNNSSSNNNNNRATSADTSKENSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDLNIENFFTKEMFPACSTNFPTVGMSSEMANSAYFQFNPVQQVVGLDMAISPSEMALRRTTSAPVSVPDTFLDTSCFTQAQPTSSTWETDLQSLYNVEFHQGRPNAFPPQPFTGSLEANNLKMEM* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00262 452 MobiDBLite consensus disorder prediction 172 213 - -
Eupl13g00262 452 FunFam Basic helix-loop-helix transcription factor 256 328 - -
Eupl13g00262 452 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 257 327 IPR036638 GO:0046983
Eupl13g00262 452 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 164 360 IPR024097 GO:0006355
Eupl13g00262 452 Pfam Helix-loop-helix DNA-binding domain 263 310 IPR011598 GO:0046983
Eupl13g00262 452 MobiDBLite consensus disorder prediction 433 452 - -
Eupl13g00262 452 MobiDBLite consensus disorder prediction 214 239 - -
Eupl13g00262 452 MobiDBLite consensus disorder prediction 172 248 - -
Eupl13g00262 452 CDD bHLH_AtBPE_like 249 334 - -
Eupl13g00262 452 Gene3D - 256 331 IPR036638 GO:0046983
Eupl13g00262 452 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 259 309 IPR011598 GO:0046983
Eupl13g00262 452 SMART finulus 265 315 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00262 Eupl-Chr13 3715059 3718436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00262 169 422 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 47.619 5.44e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl13g00262 HLH 2.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00262 - - nnu:104601846 526.939