Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00261 ATGGCCTCCAGCTCTCTGCGTACCTCTAGCTCATCTTGGACACCCCAGCAAAACAAATTGTTTGAAAATGCCCTGGCCGTATACGATAGGGACACTCCCGACCGTTGGCAGAGAGTGGCCAATGCCGTGGGTGGGAAATCCGCGGAGGAAGTGAAGAGGCATTATGAGATTCTTATACGGGACGTGAATCATATCGAGTCTGGCCGAGTTCCCTATCCCAAATACAGGTCCTCTTGA 237 0.519 MASSSLRTSSSSWTPQQNKLFENALAVYDRDTPDRWQRVANAVGGKSAEEVKRHYEILIRDVNHIESGRVPYPKYRSS* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00261 78 SUPERFAMILY Homeodomain-like 11 67 IPR009057 -
Eupl13g00261 78 ProSiteProfiles Myb-like domain profile. 5 59 IPR001005 -
Eupl13g00261 78 CDD SANT 13 55 IPR001005 -
Eupl13g00261 78 SMART sant 9 61 IPR001005 -
Eupl13g00261 78 ProSiteProfiles SANT domain profile. 8 63 IPR017884 -
Eupl13g00261 78 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 77 IPR044636 GO:0003700
Eupl13g00261 78 Pfam Myb-like DNA-binding domain 11 55 IPR001005 -
Eupl13g00261 78 FunFam Transcription factor SRM1 5 72 - -
Eupl13g00261 78 Gene3D - 3 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00261 Eupl-Chr13 3685060 3685445 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl13g00261 Myb_DNA-binding 6.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00261 - - thj:104807455 130.954