Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00248 ATGCACATGCAACAATCAAAGATGAAGAAGCCGAAGATGCATCATAGATTGACAGATTGGCGAACAGCACTAGAGTTTTCTCTTCTATTTTTACTATTTCAGTCTACATTGGGGCAGCTAGTCCGTTTAAGTTCCGGCACCGAGCAGGCTGCCCTATTTGACCTACGCTCATCATTAGGGCTGAGGAGCAGAGACTGGCCTAGGAAATCAGACCCGTGCTTGCTCTGGGTTGGGGTTCAATGTCGACAAGATGGTCGGGTCATCGGGATCAACATATCAGGGCTCAGGCGCACCCGGCTTGCTCGTCTCAATCCCCAGTTCTCCGTTGATGCCCTCGCCAATTTTACTCTCTTGGCCTCCTTTAATGCCTCTGGTTTCTTGCTCCCTGGTCCCATTCCTGACTGGTTCGGACGACGCCTCCCGTCACTCCACTTGCTCGATCTCCGGTCTTGTTCCATAAACGGTCCTATTCCTTCATTGCTTGGAAATTTAACCGATCTCAATTTGCTCAATCTCTCTGGTAATAGAATTACTGGCATAATTCCTCCAACCCTAGGTCAGCTCTCGCGTCTTTTGATTCTTGATCTATCGCAGAATTTACTCACCGGATCCATCTCTTCGTCTTTCTCCTCCCTTGACAATCTTACTTTCCTTGACGTTTCTTCGAATTTCCTGTCTGGACCGATTCCTCCTACTCTGGGAAGCCTCTCCAAGCTTCAATTCTTGAATCTTTCCAATAACAGCCTCTCGGCTTCCATTCCTGTCCAGCTTGGTGACCTTTCTCGCCTCGTCGACCTTGATCTCAGTTTAAATTCTTTGTCTGGATCGATACCCGTTGATTTGAGAGGATTGAGGAGTTTGCAGAAAATGGTGGTTGGGAACAATAGTTTATCTGGTTTGTTACCAGAGAACTTGTTTTCTGGTCTTTCTCGGCTGCAATTTGTAGTTCTCAGTCACAACAGTTTATCTGGTGCTCTTCCTGATTTATTGTGGTCTATGCCTGAACTTATCTTCCTTGATGTCTCATACAATAATTTCACAGGTATTCTTCCTAACCTTAGTTCGAATGCTAGTGGAAGTGCTGCAGTGTTCAACCTCTCCCACAACGAGTTTTATGGAACTCTGATTTCTCAACTTGGGAAGTTCAATATTATTGATCTGTCCAATAATTATTTCCAAGGCACAATTCCTGATGATACACACAGGAATGCTTCTCTCACGAGCAATTGCCTTCGAAAGGTTACAAATCAGAGGAGTTTGGAGGACTGTACATTGTTCTATGCTGATAGAGGCTTGAGTTTCGATAATTTTGGAGCCCCAAAAGCAACCCAACCGCTTGCGCCAGGACCCGCCCGGAAGAGCAACAGACGGTTAATATTCATATTGGTCGGAGTATGCGGCGGCCTTGGGTTTATTGTACTTCTGGTGTTGGTGCTCTTATTGTGCCTGCGGACACGTGAGAGGGGTATTGCTGATCAGGGGAGGAGAGGTTTGGGCACTGTCCCTGAAGGAGGCATCCCACCTCCTTCCAGTGTCTCTATTAACTTCTTGAGTGTGGGACAAGCATTTACATATGAGCAATTAGTCCGAGCCACAGGTGATTTTAATGATTCAAATCTCATCAAACATGGCCACTCAGGGGACCTTTTCCGAGGTGTCTTGGAAGGTGGGATTCCTGTGGTCATCAAGAGGATTGATGTCCGCTCGTTCAATAAGGAATCATACATGGTGGAGTTGGACTTGTTCAGCAGGGCTTCTCATACCAGACTGGTCCCCCTCTTGGGGCACTGTTTGCAGCACGAGAACGAGAAGCTCCTGGTTTACAAATATATGCCAAATGGGGACTTGTCTAATTCCTTGTACAGGAAGACAAATCAGGAAGATGACAATTTGCAGTCTCTAGATTGGATAACGAGACTGAAAGTTGCAATAGGAGCTGCGGAGGGTCTATCTTATCTACATCATGAATGTAGTCCACCCCTTGTTCACAGAGATGTTCAAGCAAGCAGTATCCTTCTCGATGATAAATTTGAAGTGCGGCTTGGAAGCTTGACCAAGGTATGCACTCAAGAAGGGGATAATCACCAAAATATGATCACGAGGTTGCTACGGTTGCCACAGACCTCTGAAAAAGGCCCTTCTGGTTCTCCGTCAGCAACTTGTGCTTACGATGTTTACTGCTTTGGGAAAGTGTTGCTTGAGCTGGTCACGGGTAAGCTGGGCATTAGTGCGTCCAATGATGCCAATGTGAACGAGTGGTTGGAACACACACTACCTTACATCAGTATATATGAGAAAGACCTGGTTACAAAAGTCGTGGACCCGTCTCTCATTATAGATGAGGACCTGTTGGAGGAGGTCTGGGCCATGGCGATTGTCGCCAGGTCATGCCTTAACCCGAAGCCTTCCAAACGCCCGCTCATGAGATACATCCTCAAAGCATTGGAGAATCCATTGAAGGTGGTGAGGGAAGAAAACTCCAGCTCAGCGAGGCTGAGAACAACTTCATCCAGGGGATCTTGGAATGCAGCTCTCTTTGGTAGTTGGCATCACAGCTCGTCTGAAATCGTGGCCATTCCTGGCCCAACTAATAGAGAGGGAACCAATAGCTTAAAACAGTCAGGTACAGGTGGTTCACAGGGAAGCGGGCGATTTGGTGTGGGTGATCTCTCATCTTTCAACAAGAGGCTATCAAGTGATATATTTCCGGAACCAACCGATGGCGTAGGGAGACCAAATGAAGACTAG 2748 0.4691 MHMQQSKMKKPKMHHRLTDWRTALEFSLLFLLFQSTLGQLVRLSSGTEQAALFDLRSSLGLRSRDWPRKSDPCLLWVGVQCRQDGRVIGINISGLRRTRLARLNPQFSVDALANFTLLASFNASGFLLPGPIPDWFGRRLPSLHLLDLRSCSINGPIPSLLGNLTDLNLLNLSGNRITGIIPPTLGQLSRLLILDLSQNLLTGSISSSFSSLDNLTFLDVSSNFLSGPIPPTLGSLSKLQFLNLSNNSLSASIPVQLGDLSRLVDLDLSLNSLSGSIPVDLRGLRSLQKMVVGNNSLSGLLPENLFSGLSRLQFVVLSHNSLSGALPDLLWSMPELIFLDVSYNNFTGILPNLSSNASGSAAVFNLSHNEFYGTLISQLGKFNIIDLSNNYFQGTIPDDTHRNASLTSNCLRKVTNQRSLEDCTLFYADRGLSFDNFGAPKATQPLAPGPARKSNRRLIFILVGVCGGLGFIVLLVLVLLLCLRTRERGIADQGRRGLGTVPEGGIPPPSSVSINFLSVGQAFTYEQLVRATGDFNDSNLIKHGHSGDLFRGVLEGGIPVVIKRIDVRSFNKESYMVELDLFSRASHTRLVPLLGHCLQHENEKLLVYKYMPNGDLSNSLYRKTNQEDDNLQSLDWITRLKVAIGAAEGLSYLHHECSPPLVHRDVQASSILLDDKFEVRLGSLTKVCTQEGDNHQNMITRLLRLPQTSEKGPSGSPSATCAYDVYCFGKVLLELVTGKLGISASNDANVNEWLEHTLPYISIYEKDLVTKVVDPSLIIDEDLLEEVWAMAIVARSCLNPKPSKRPLMRYILKALENPLKVVREENSSSARLRTTSSRGSWNAALFGSWHHSSSEIVAIPGPTNREGTNSLKQSGTGGSQGSGRFGVGDLSSFNKRLSSDIFPEPTDGVGRPNED* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00248 915 SMART LRR_typ_2 188 211 IPR003591 -
Eupl13g00248 915 SMART LRR_typ_2 164 187 IPR003591 -
Eupl13g00248 915 SMART LRR_typ_2 309 332 IPR003591 -
Eupl13g00248 915 SMART LRR_typ_2 284 308 IPR003591 -
Eupl13g00248 915 SMART LRR_typ_2 236 260 IPR003591 -
Eupl13g00248 915 SMART LRR_typ_2 333 356 IPR003591 -
Eupl13g00248 915 Gene3D Ribonuclease Inhibitor 306 410 IPR032675 -
Eupl13g00248 915 Pfam Protein tyrosine and serine/threonine kinase 541 813 IPR001245 GO:0004672|GO:0006468
Eupl13g00248 915 FunFam Predicted protein 506 610 - -
Eupl13g00248 915 Gene3D Transferase(Phosphotransferase) domain 1 611 837 - -
Eupl13g00248 915 Pfam Leucine rich repeat 167 223 IPR001611 GO:0005515
Eupl13g00248 915 Pfam Leucine rich repeat 285 346 IPR001611 GO:0005515
Eupl13g00248 915 SUPERFAMILY L domain-like 91 434 - -
Eupl13g00248 915 Gene3D Ribonuclease Inhibitor 206 305 IPR032675 -
Eupl13g00248 915 Gene3D Ribonuclease Inhibitor 45 205 IPR032675 -
Eupl13g00248 915 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 96 209 - -
Eupl13g00248 915 MobiDBLite consensus disorder prediction 857 915 - -
Eupl13g00248 915 Gene3D Phosphorylase Kinase; domain 1 510 610 - -
Eupl13g00248 915 ProSiteProfiles Protein kinase domain profile. 535 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00248 915 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 107 205 - -
Eupl13g00248 915 FunFam Putative LRR receptor-like serine/threonine-protein kinase 611 835 - -
Eupl13g00248 915 MobiDBLite consensus disorder prediction 857 899 - -
Eupl13g00248 915 FunFam Leucine-rich repeat receptor protein kinase EMS1 206 304 - -
Eupl13g00248 915 SUPERFAMILY Protein kinase-like (PK-like) 511 815 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00248 Eupl-Chr13 3458338 3467154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00248 47 707 Miscellaneous Gene Families AT2G16250 57.313 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Eupl13g00248 PK_Tyr_Ser-Thr 7.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00248 - - nnu:104595683 1202.58