Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00236 ATGGCGGGAGATGGGAAACACTCCGGAGAAGACAACCGGAGTTCCAACAACTATCTAGCACATAAGCTCTTGTCGAAGACGCCATTTATCGGCCTGAAACTTTACGTCGTAATTGGAAGTTGTGTCGGTTGTTTGATCGCAATTGCTCTTCTGATTCTTTTCTATTTCCGTTCGAATCGGAAGTCAAGAAAAAGTAGAATGCGTGTGAATCACATTTCAGGTTTAATTCCGACTGTTTCAAATGAAATCACAGACTTAAAAGCTTCGGATTGGGCGGAGACTAGTAAGATCGCCGATACAGAGAAAAAGGAAAAAGAAGAGAAAGGATTTGGTACTGCAGACGCAGATAAGGTGATTGATATCGGAAATCGGAGTCAAGAAAGTAACTTATCGCACGGTAGCCGTAGCTCATTGTCGACGTTGTCGGTAGATGTTCCGAATATCGGGTGGGGCCGGTGGTACGCGTTGAAAGAGCTGCAGATCGCAACCGGTGGATTCGTTGACGAGAATGTGATCGGAGAAGGAGGGTACGGAGTCGTTTATAGAGGAGTATTGCCGGATAGTTCTGTAGTTGCAGTGAAGAACCTTTTCAACAACAAGGGTCAGGCGGAGAAGGAGTTCAAGGTGGAAGTTGAAGCCATTGGAAAAGTAAGGCATAAAAACCTGGTGGGCCTTATTGGGTATTGTGCGGAAGGTGTTCAAAGGATGCTCGTATATGAATATGTAGACAATGGCAATTTAGAGCAATGGTTGCATGGTGATGTTGGGCCTGTTAGCCCTCTGACATGGGATGTTCGAATGAAGATCGCCATAGGAACAGCTAAAGGCTTAACCTATTTGCACGAAGGATTAGAACCCAAAGTTGTGCACCGAGATATCAAATCCAGTAATATTCTTCTGGATAGAAAATGGAACCCAAAGGTCTCAGATTTTGGACTGGCTAAAGTATTGGGATCTGATGCAAGCTATGTGACCACTCGTGTAATGGGAACATTTGGATACGTAGCTCCTGAGTATGCATGCACTGGTATGCTTAACGAGGGCAGTGATGTCTATAGTTTTGGTGTTCTGCTCATGGAAATAATCTCAGGAAGGAGCCCAGTTGATTATGCCAGACCAGCTGCAGAGGTGAATTTGGTTGACTGGTTTAAAGGGCTGGTAGCAAGTCGGCGTGGAGAAGAAGTGGTGGATCCGCTTATTGAAGTTCATCCATCGCCGAGAACTTTGAAACGGATATTGCTGGTTTGCCTCCGCTGTATACATTTGGATGCTAATAAGCGACCAAAGATGGGGCAAGTTGTACACATGCTTGAAGCATATGAGTTTCCCTTCCAAGTTGAACACGGCTCAGCCCAATATTAG 1362 0.4515 MAGDGKHSGEDNRSSNNYLAHKLLSKTPFIGLKLYVVIGSCVGCLIAIALLILFYFRSNRKSRKSRMRVNHISGLIPTVSNEITDLKASDWAETSKIADTEKKEKEEKGFGTADADKVIDIGNRSQESNLSHGSRSSLSTLSVDVPNIGWGRWYALKELQIATGGFVDENVIGEGGYGVVYRGVLPDSSVVAVKNLFNNKGQAEKEFKVEVEAIGKVRHKNLVGLIGYCAEGVQRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDVRMKIAIGTAKGLTYLHEGLEPKVVHRDIKSSNILLDRKWNPKVSDFGLAKVLGSDASYVTTRVMGTFGYVAPEYACTGMLNEGSDVYSFGVLLMEIISGRSPVDYARPAAEVNLVDWFKGLVASRRGEEVVDPLIEVHPSPRTLKRILLVCLRCIHLDANKRPKMGQVVHMLEAYEFPFQVEHGSAQY* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00236 453 CDD STKc_IRAK 172 438 - -
Eupl13g00236 453 FunFam Putative receptor-like serine/threonine-protein kinase 242 452 - -
Eupl13g00236 453 ProSiteProfiles Protein kinase domain profile. 166 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00236 453 ProSitePatterns Protein kinases ATP-binding region signature. 172 194 IPR017441 GO:0005524
Eupl13g00236 453 Gene3D Transferase(Phosphotransferase) domain 1 242 446 - -
Eupl13g00236 453 FunFam Probable serine/threonine-protein kinase At1g01540 146 241 - -
Eupl13g00236 453 SMART serkin_6 166 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00236 453 SUPERFAMILY Protein kinase-like (PK-like) 141 441 IPR011009 -
Eupl13g00236 453 Gene3D Phosphorylase Kinase; domain 1 134 241 - -
Eupl13g00236 453 Pfam Protein kinase domain 167 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00236 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Eupl13g00236 453 PANTHER OS01G0323000 PROTEIN 15 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00236 Eupl-Chr13 3239728 3244600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00236 145 438 Receptor kinase-like Gene Family AT4G02010 46.309 9.76e-89 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Eupl13g00236 Pkinase 9.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00236 - - nnu:104595699 638.262