Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00234 ATGGCGTATATGTGCGCCGATAGCGGAAATCTAATAGCGATCGCCCAACAAGTCATCAACCAGCAACAACAACAGCAGCAACAGCAACAACAACAACAACAGCAGCAGCAGGTCGTCGGTGTCAACCCTTTCTCTCTAGGCCCATGGGATGGGACCCACCAACCCATCGCCAATCCTCCATCTTTTGGGTTCGGTCTCGCCGGTGCTGGATTGTCCGACCCGTTTTCCGTCGGTGGGACGTCAGATACCGTTGACACCGTCCTCTCCTTCCCTCACTTGGACCACCATTCTACCGGGTTCAGACTCTCCGATTTCGGCGGAAGTTCTAGTGGGGATTTCGACTCGGACGAGTGGATGGAGAGCTTAATGGGTGGTGTAGAGTCGACGGAGAGCTCTGAGCTTCCCTCCCGCTGCGACACGTGGCATTACAACGCCACATTCGCTCCCTACGGCGGCGACACGTTCTTCTCCTGTTCGAGTCAAGTTAGTCTCTCACCTCCGCCGTCGGATCTCAACAGACTCGTCTTCTCGGACACCCAGAAAAATCCCAGCGCGCTTCAAGCTCAAATAACGACGTGGGGCCCACCACCTTCGCCTCCACCGCCTCTACAGGTTCCCGAAGAAACACTGCCGCCAAATCCTCCAACGCAGACCCACAAGAAAAGTGACGTCGCTGGCGTTTTATCCCAATCGCCTGAAACCGAGTCAACCTCGCCGCTAGTGAAATCCCTTCTTGACTGCGCCAGAATCGTCGATTCCGAACCCGATCGCGCCGTGAAATCTCTGATACGAATCCGGGAGTCGGTATCAGAACGCGGCGATCCCACCGAACGAGTCGTTTTTTATTTCTCTGAAGCTCTTTACAGCCGGGTTTCTTCGAAAATTGAGAAGATCCCATCCATGTTCAAGACCTCTTCTGAGGATTTCATCCTCTCTTACAAAGCTTTGAACGATGCCTGCCCTTATTCGAAGTTTGCCCATTTAACGGCGAACCAAGCAATTCTTGAAGCGACCGAGTCAGCGAGTGAAATACACATTGTCGACTTCGGAATCGTTCAAGGGGTTCAGTGGGCGGCGCTTCTACAAGCTTTGGCGACTCGGTCCGCAGGAAAACCCACGAGAATCCGAATTTCCGGCATTCCCGCTCCAGCCCTCGGTAGTTCGCCGGCGGCGTCTCTCTTCGCCACCGGTATTCGTCTCCGCGATTTCGCAAAGCTTCTTGATCTCAATTTTGAGTTCAAACCCATTTTAACCCCGATTCAGGAGCTCACAGAGTCAAGCTTCCGAGTCGACCCAGACGAGGTTTTGGCCGTGAATTTCATGCTTCAACTGTATAACTTGTTAGGCGAGACAACGGTTGCAGTAGAAAGCGCTCTCCGACTAGCGAAATCGCTGAACCCGAAGGTCGTGACACTCGGGGAGTACGAAGCGAGCTTGAACCGGGTCGGATACTTCGACCGGTTTAAGAACGCCTTGAGTTACTATTCAGCGGTTTTCGATTCGCTCGAACCATGCTTGGCAAGAGACTCCGAGGAGCGGCTCCGGGTGGAGACATTGCTGCTTGGGCGGCGGATCGCCGGTGTAGTTGGTCCTGGTGAAGGGCCGATGAGACTGGAACGAATGCAAGAGAAAAGTCAGTGGAAAGCTTTGATGGAAGGTTGTGGGTTCGAGTCGATCGGTTTTAGCCATTACGCAGTTAGCCAGGCTAAGATTCTTCTCTGGAGCTACCATTTCAGATCTATGTATTCTCTAATGGAGTCAACACATGGGTTCCTTTCGCTTGCTTGGGATGATGTAGAACTTCTCACCGTTTCGTCATGGCGTTAA 1827 0.5298 MAYMCADSGNLIAIAQQVINQQQQQQQQQQQQQQQQQVVGVNPFSLGPWDGTHQPIANPPSFGFGLAGAGLSDPFSVGGTSDTVDTVLSFPHLDHHSTGFRLSDFGGSSSGDFDSDEWMESLMGGVESTESSELPSRCDTWHYNATFAPYGGDTFFSCSSQVSLSPPPSDLNRLVFSDTQKNPSALQAQITTWGPPPSPPPPLQVPEETLPPNPPTQTHKKSDVAGVLSQSPETESTSPLVKSLLDCARIVDSEPDRAVKSLIRIRESVSERGDPTERVVFYFSEALYSRVSSKIEKIPSMFKTSSEDFILSYKALNDACPYSKFAHLTANQAILEATESASEIHIVDFGIVQGVQWAALLQALATRSAGKPTRIRISGIPAPALGSSPAASLFATGIRLRDFAKLLDLNFEFKPILTPIQELTESSFRVDPDEVLAVNFMLQLYNLLGETTVAVESALRLAKSLNPKVVTLGEYEASLNRVGYFDRFKNALSYYSAVFDSLEPCLARDSEERLRVETLLLGRRIAGVVGPGEGPMRLERMQEKSQWKALMEGCGFESIGFSHYAVSQAKILLWSYHFRSMYSLMESTHGFLSLAWDDVELLTVSSWR* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00234 608 ProSiteProfiles GRAS family profile. 231 608 IPR005202 -
Eupl13g00234 608 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 222 603 IPR005202 -
Eupl13g00234 608 MobiDBLite consensus disorder prediction 214 235 - -
Eupl13g00234 608 MobiDBLite consensus disorder prediction 184 235 - -
Eupl13g00234 608 Coils Coil 12 35 - -
Eupl13g00234 608 MobiDBLite consensus disorder prediction 193 213 - -
Eupl13g00234 608 Pfam GRAS domain family 240 608 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00234 Eupl-Chr13 3173418 3175943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00234 1 608 GRAS Transcription Factor Family AT5G66770 58.023 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl13g00234 GRAS 1.1e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00234 - - nnu:104595703 820.461