Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl13g00232 | ATGGCTGAACCAGAACTTCTTCTTCTCTTCCTTCCTGCAGCAATTTTAGCTCTAGTTATGGTGTGGAATTTCATCAAAAGGAAGGAAAAAACACTTAAACTTCCACCAGGAAACATGGGTTGGCCTTTTCTTGGCGAAACCATTGGTTATCTGAAGCCTTATTCAGCTACTTCTATTGGAGAATTCATGGAGCAACATATATCAAGGTTTGGGAAGATCTACAAGTCAAATTTGTTCGGTGCGCCCACGATAGTCTCAGCCGATCCCGAGCTAAACCGGTTTATATTACAAAACGAGGGACGATTGTTCGAATGCAGTTATCCAAGTAGTATAGGTGGAATTCTTGGGAAATGGTCGATGTTGGTTTTGGTAGGAGACATGCATAGGGACATGAGGATGATCTCTATGAACTTCATGAGCAATGCGATGCTTCGGACGCATCTGTTACGAGAAATTGAGAGGCATACCTTGTTGGTTCTAAGATCTTGGAAGGAGAATTTCACTCTTTTTGCCCAAGATGAAGCAAAGAAGTTTACCTTCAATTTGATGGCGAAACAACTCATGAGCATGGATCCCGGAAAGCCTGAAACCGAGCAGCTGAAGAGAGAGTACATTACGTTCATGAAAGGAGTCGTATCGCCACCTTTAAATTTGCCTGGAACCGCATATAGAAGGGCTTTAAAGTCGAGATCGAGCATACTTAAAGTTATCGAGCGGAAAATGGAAGAGAGAAACCAGAAGACGAACGAGGAACATGAGAAAAAAGAAGAAGATGATTTCCTTGGATGGGTTTTGAAGCATTCAAATCTTTCCACAGAACAGATTCTTGATTTGATACTAAGCTTGCTTTTCGCCGGTCATGAAACTTCCTCAGTAGCCATAGCTTTAGCTATCTACTTCTTGCAAGGTTGTCCCAAAGCAGTTCAACAGTTAACAGTCATCAGCGAGACACTCCGGCTTGGGAACGTTGTTAGGTTCGTGCACAGGAAGGCCATTAGAGACGTTAGGTACAAAGGGTTTGACATTCCATGTGGATGGAAAGTTCTTCCAGTGTTTGCTGCCGTACATTTGGATCCTTTGATCTACGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAGTACTAATTCTCGAGGTTCTTCTTCATCTTCTTTTTCGAGCGCGGGGACGACCAACAACTTCATGCCATTTGGTGGTGGAACGCGACTATGCTCTGGGTCAGAACTGGCCAAGTTGGAGATGGCTGTGTTCATCCACCACCTGGTCCTGAATTACCGTTGGGAATTAGCTGAACCGGACGAAGCTCTCGCCTTCCCGTTCGTCGCCTTCCCCAAAGGCCTACCCATCAAGCTTTGCATCCTCTGCGATCCCCCAGAAAGCAAACCAGAGAGAGAGAGAGACGGAGAGATGTGGCGCTGCGTTTCTCGTGGATTTGGTTTTTCTTCTTCGTCTTCGAAGAGATTAATCTCAAGCGAACCTCTTAAACCTCTCATTGCGAGATTCCTCTCCACTGAATCACCTGGGGGACGATCTTCTTATACGATCGTTGATCACACTTATGATGCTGTCGTTGTGGGAGCAGGCGGCGCAGGACTCAGAGCGGCCATTGGACTCTCTGAGCATGGATTCAACACCGCTTGCATCACCAAGCTTTTCCCGACTCGTTCGCATACGGTTGCCGCACAGGGTGGTATAAATGCGGCATTAGGAAATATGACTGAAGATGACTGGAGGTGGCATATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTGATCAGGATGCTATTCAATATATGTGTAGAGAGGCACCAAAAGCAGTAATAGAGCTTGAGAATTATGGATTACCATTTTCTCGAACTGAAGATGGAAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGAAAAGGTGGACAGGCCTACCGTTGTGCATGTGCTGCTGATCGAACTGGCCATGCTTTGCTGCACAGCTTGTATGGACAGGCAATGAAACACAATACACAATTTTTTGTGGAATACTTTGCATTGGATCTTATAATGGATAGTAGTGGTACCTGTCAAGGAGTTATTGCTCTAAATATGGAGGATGGGACACTCCATCGGTTTCATGCTTCTTCAACCATTTTGGCCACAGGGGGTTACGGTAGAGCGTACTTTTCTGCAACCTCAGCTCATACATGTACTGGAGATGGTAATGCCATGGTCGCACGTGCTGGTTTACCTCTTGAGGATCTTGAGTTTGTGCAGTTTCACCCCACGGGTATATATGGTGCAGGGTGCCTCATTACCGAAGGATCTCGTGGTGAAGGTGGTATTCTTAGGAACAGTGAAGGTGAACGATTTATGGAACGCTATGCACCTACTGCCAAGGATCTTGCATCAAGAGATGTTGTTTCGAGATCTATGACCATGGAAATCCGAGAAGGTCGTGGTGTAGGACCACTGAAGGACCACATCTATCTCCACTTGAATCACTTACCCCCAGATGTACTGAAGGAGAGACTTCCCGGAATCTCTGAAACTGCTGCCATTTTTGCGGGTGTCGATGTTACCAAGGAGCCCATCCCTGTGTTACCTACTGTTCATTATAATATGGGAGGTATCCCCACAAATTACCATGGAGAGGTGGTTAGCATCAAAGGGGATGATCCAGATGCTGTAGTTCCTGGACTAATGGCTGCTGGGGAGGCAGCATGTGCATCAGTTCATGGTGCCAATCGGCTTGGTGCAAATTCTTTGCTTGACATTGTTGTTTTTGGTCGAGCTTGTGCAAATAGGGTTGCGGAGATTCATAAACCAGGAGAGAAACAAAAGCCTTTGGAAAGTGATGCTGGGGAGAAGACTATTGCATGGCTGGATAAACTAAGGAACTCGAATGGTTCATTGCCAACTTCAAAGATCCGTCTGAATATGCAACGGGTGATGCAAACTAATGCTGCTGTGTTCCGCACTCAGGAAACATTAGAAGAAGGTTGTCAGTTAATTGATAAAGCATGGGAGAGCTTTCATGATGTTAAGTTGCAGGATCGGAGTCTTATATGGAACTCTGACTTGATAGAAACAATTGAACTTGAAAACCTTTTGATAAATGCCTGTATAACCATGCACTCTGCTGAGGCTAGGAAGGAGAGCAGAGGAGCCCATGCCCGTGAAGATTTTACTAAAAGGGATGATGTGAATTGGATGAAGCACACTTTGGGGTATTGGGAGAATGAGAAGGTCCGGCTAGATTACAGGCCAGTCCATATGAACACATTGGACGATGAAGTTGAATCATTCCCTCCAAAGGCGCGTGTTTATTGA | 3318 | 0.4539 | MAEPELLLLFLPAAILALVMVWNFIKRKEKTLKLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRFGKIYKSNLFGAPTIVSADPELNRFILQNEGRLFECSYPSSIGGILGKWSMLVLVGDMHRDMRMISMNFMSNAMLRTHLLREIERHTLLVLRSWKENFTLFAQDEAKKFTFNLMAKQLMSMDPGKPETEQLKREYITFMKGVVSPPLNLPGTAYRRALKSRSSILKVIERKMEERNQKTNEEHEKKEEDDFLGWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLQGCPKAVQQLTVISETLRLGNVVRFVHRKAIRDVRYKGFDIPCGWKVLPVFAAVHLDPLIYDQPQHFNPWRWQSTNSRGSSSSSFSSAGTTNNFMPFGGGTRLCSGSELAKLEMAVFIHHLVLNYRWELAEPDEALAFPFVAFPKGLPIKLCILCDPPESKPERERDGEMWRCVSRGFGFSSSSSKRLISSEPLKPLIARFLSTESPGGRSSYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHSLYGQAMKHNTQFFVEYFALDLIMDSSGTCQGVIALNMEDGTLHRFHASSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVSIKGDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIHKPGEKQKPLESDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQTNAAVFRTQETLEEGCQLIDKAWESFHDVKLQDRSLIWNSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDVNWMKHTLGYWENEKVRLDYRPVHMNTLDDEVESFPPKARVY* | 1106 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl13g00232 | 1105 | NCBIfam | succinate dehydrogenase or fumarate reductase, flavoprotein subunit | 522 | 1105 | IPR014006 | GO:0016627|GO:0022900|GO:0050660 | |
| Eupl13g00232 | 1105 | Gene3D | Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 760 | 863 | IPR027477 | - | |
| Eupl13g00232 | 1105 | FunFam | Succinate dehydrogenase complex, subunit A, flavoprotein (Fp) | 511 | 734 | - | - | |
| Eupl13g00232 | 1105 | FunFam | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | 864 | 929 | - | - | |
| Eupl13g00232 | 1105 | Gene3D | - | 945 | 1055 | - | - | |
| Eupl13g00232 | 1105 | SUPERFAMILY | Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 750 | 868 | IPR027477 | - | |
| Eupl13g00232 | 1105 | Gene3D | Cytochrome P450 | 25 | 452 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Eupl13g00232 | 1105 | FunFam | Succinate dehydrogenase flavoprotein subunit (SdhA) | 944 | 1060 | - | - | |
| Eupl13g00232 | 1105 | ProSitePatterns | Fumarate reductase / succinate dehydrogenase FAD-binding site. | 556 | 565 | IPR003952 | GO:0016491 | |
| Eupl13g00232 | 1105 | Gene3D | - | 522 | 929 | IPR036188 | - |
Showing 1 to 10 of 33 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl13g00232 | K00234 | - | nnu:104595705 | 1202.58 |
Showing 1 to 1 of 1 entries