Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00226 ATGTATGACAGTGATTGGAACCCTCAAATGGATTTGCAGGCCATGGATAGATGCCACAGGATAGGCCAAACCCGACCTGTTCATGTATACAGGCTTGCGACTGCCCAATCCGTTGAGGGTCGCATATTGAAGAGAGCTTTCAGTAAGTTGAAGCTTGAGCATGTGGTGATTGGGAAAGGGCAGTTCCAGCAGGAGAGAACCAAGCCCAATTCTTTGGTTGTCGTTGAGGAAGAGGATCTGTTGGCTCTGCTTCGAGATGAAGAAGATGATGAGGAGAAGCAGATTCAGACAGATATCTGTGACAAAGATCTTGAAAGGGTTTTGGATCGTAGCGATCTGATTTCTGTTCCCCCGTATGATGATGGTAAAATCACAGCTGCTGGTAATGCATTTCCCCTTAAAGGGCCTGGTTGGGAGGTGGTTATACCAGCTAAGAGTGGAGGTGTGCTGTCTACACTCAATAGCTGA 468 0.4722 MYDSDWNPQMDLQAMDRCHRIGQTRPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFQQERTKPNSLVVVEEEDLLALLRDEEDDEEKQIQTDICDKDLERVLDRSDLISVPPYDDGKITAAGNAFPLKGPGWEVVIPAKSGGVLSTLNS* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00226 155 Coils Coil 74 94 - -
Eupl13g00226 155 CDD SF2_C_SNF 1 32 - -
Eupl13g00226 155 PANTHER LYMPHOID-SPECIFIC HELICASE 1 115 - -
Eupl13g00226 155 Gene3D - 1 116 IPR027417 -
Eupl13g00226 155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 116 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00226 Eupl-Chr13 3012000 3013676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00226 1 59 RAD5 or RAD16-like Gene Family AT1G11100 47.458 1.14e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00226 K19001 - rvl:131298561 235.343