Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00203 ATGGCGAAACGATTCAGGCTTCGAATTTCCCGAGTCATACCATCCTTCCAGTCTTGCCGGTCCAAAGACCCCTCCAACTTGCCGGAAAACCCATTACCAGCATTCTTCCGCCTCTCTCCTGTTAACCCTAAAGCCATCGACATCGACTTCCCGCCGATCACAGCCTTCCCGGCCCCACCACCTTCCAAGTCTCACCATTCTTCCCTTAAACGACACGTGTCGTCCGCTATCGTATCAGTCGGTTGTGGGTGCCGATCAAAATCCGGCAGACCGTACGTTACATCCGACGATGACTCGCCAAATTTCCGATGGAAGAAAGAGGAGAAATGGCACGTAGTTGCAAGAGTCCATGATGAGATACCTCGCAGGAAAATATACAACTCGTCAGTTTCCGGAGATTCCGAAGGCGATATATCTCCATCTCCACCGCCGCGGCCGGCTTCGAAAAAGAAACAAAGAAACAAAAAGAAGAAATCGAAACCGAGAGCTCGTTTCAGTACTTCTTCGGCTGATAGCGGTTGGTTTAGCAGCGAAGGCGGAGACGAGAGCTACGATGAGGAGACTGAAACCCTTGTTTCTTCTTCTAGAACCTTCTCGACTGATTCTTCTACGGACTTCGATACCCACTTGGAGACGATTCGTGAGTCACCTATTAACGGTCCAAGGCGTAAGAAGAAGAATCTTAAAAAGATTCGAAAGGTGAAACGTTACCCTTCGAAGAACAAAGGAGGAGCTACCACGGGGAAGACAATGACGTACCCATCGCCGGAAACTGAGTCACCGGCGAGGTTATCGGTGTTTCAGCGACTGATGCCGTGTACGGTGGAGGGGAAGGTGAAAGAAAGCTTCGCGGTTGTGAAAAAATCGGAGGATCCTTACGAGGATTTCAGGCGTTCAATGCTGGAGATGATTCTGGAGAAGCAGATGTTCGAACCCAGAGATTTAGAGCAGCTCTTGCATTGTTTTCTCTCTCTAAACTCTCGACACCATCATGCTGTCATCGTCGAGGCGTTCTCAGAGATTTGGGAGGTCTTGTTCTGTAAATCTCCCAAAACCTAA 1059 0.4939 MAKRFRLRISRVIPSFQSCRSKDPSNLPENPLPAFFRLSPVNPKAIDIDFPPITAFPAPPPSKSHHSSLKRHVSSAIVSVGCGCRSKSGRPYVTSDDDSPNFRWKKEEKWHVVARVHDEIPRRKIYNSSVSGDSEGDISPSPPPRPASKKKQRNKKKKSKPRARFSTSSADSGWFSSEGGDESYDEETETLVSSSRTFSTDSSTDFDTHLETIRESPINGPRRKKKNLKKIRKVKRYPSKNKGGATTGKTMTYPSPETESPARLSVFQRLMPCTVEGKVKESFAVVKKSEDPYEDFRRSMLEMILEKQMFEPRDLEQLLHCFLSLNSRHHHAVIVEAFSEIWEVLFCKSPKT* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00203 352 MobiDBLite consensus disorder prediction 126 226 - -
Eupl13g00203 352 MobiDBLite consensus disorder prediction 238 259 - -
Eupl13g00203 352 MobiDBLite consensus disorder prediction 190 206 - -
Eupl13g00203 352 MobiDBLite consensus disorder prediction 148 163 - -
Eupl13g00203 352 MobiDBLite consensus disorder prediction 207 222 - -
Eupl13g00203 352 NCBIfam uncharacterized plant-specific domain TIGR01568 283 345 IPR006458 -
Eupl13g00203 352 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 119 347 IPR038933 GO:0045892
Eupl13g00203 352 MobiDBLite consensus disorder prediction 243 259 - -
Eupl13g00203 352 ProSiteProfiles OVATE domain profile. 285 344 IPR006458 -
Eupl13g00203 352 Pfam Transcriptional repressor, ovate 289 346 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00203 Eupl-Chr13 2780722 2782244 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Eupl13g00203 Ovate 1.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00203 - - vvi:100263246 444.121