Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00198 ATGGAGGAAACAGGTCGAAATTTCGGGGGCGATTTCTCTGCTGAGACTGGTATTCCGTCCGGACTGAACCGAATTAAGACTCGTCGCGGACCTCCAAAGAAGGATCGGTTAAGTTCTAGGTCTGAGGATTCGGCTACGGTTTCTGGTGGAGTTCCTCGGCCTCCACTGGCGGAGCAGAAGACGGAAAGGAACGGACATGGAAAGATTACTGACAGCAAAGAAGGACTTCGTAAAGGAAAGAAGATTGCTCGTTGGTTCACATCCTACCTCACCAAGGATTCTGATCAAGCATCTACTAATGTGCCTCAAAACACTGAGGTTGATAACCCAGAAGTTACGATGCTTGGTAAGGAGGGCTTTGTAGGAGATAAGCTTTCGACCAGAAATGAATCATCACCAGAGAGCTTCCGCACAAGAAAAGTACCAAAAGTTTTAAAAAGCTTTTCACATGAATTAGGCCCAAAGGGTGGTATACGACCTGCCCATACCCGAGCCCACAGCTATAATGATTTAAAGGAGCTTTTGGGATCACTGCGTTCAAGGTTTGATACTGCTAAAGTAGTGGTGAATGCGGAGTTGGCTAATTTTGCAGGAGATGTTGTAGAGGTTCTTGAGAGGAAGGGCTCCTCATCTCCAAAGGGACAAAAAGCAGCAGAGGATCTTCTGATGCTTGCCCAGCAATGCACAGAGATGCCCTCCACAGAGTTCCGTGCAAAGTGTGAAGGGATCGTGCAGGATCTGGCTGAGAAAAGGCATCAGTGTCAGGCAGGATTACTGAAACAGCTGTTCACACGTATGCTTTTTATTTTGACTCGCTGCACCAGGTTGTTGCAGTTTGAAAAAGATTCTGAGCCGATTGATGAGGATTCTCTTCATAAGTTTAAGCAATGTTTAGAAAGTATTCCTGCTGTTGAACTGAGCTGGGTGCCCAAGCCAAGCAGCGTTGATTTTGGTTCAAATGATACTTTGAATCAGAAGGATAGTTCCAAACATCAATCACAGGGGCAGAATGCAGCATTCCCTTGCTCAGAGAGAACTTGGTGTAGGTACAAAGAGCCATCAGATGAGAGTGACACAACTTTGAGAAAGTGTTCAAGTGCCTTGTCACAGAAGCATCTATCCCGAAATTCCCAGGTAGGAATCCAGTCAAGTGAAACTAGCATCATAACAGAATATGATTCCCACAGCTTTAGTGCCCCTCAAAGAAAGAAGGTTGAGGATAGTGTTCAACTACGTCATCAAGATAGAAGTTTTGATGGATCTGATTCAGTAATCTGTAGGATATGTGAGGAAGTTGTTCCAACTTCTCATTTGGAATCTCATTCCTATATATGTGCTTATGCGGATAAGTGTGATTTAAAATGTTTGGACATAGATGAACGCCTCTCAAAACTCGCACAGATATTGGAACAAATTGTAGAATCATGCACCTCGAGTTGTCATGCATCTTATGGTAGCCCTGAGATTTCAAGATTACAAAGTGCAAACTCTGTGGTTGGATCTGAAGGTCAGTCTCCTAAGATAATTGAGTGGCACAGTAAAGGTGTGGAAGGGATGTTTGAAGATCTCCATGAGATGGACACAGCTTGTATAGATGATTCTCACCTTGTAACTTCCAGTAATTTGAAGGGCCACCTAGGTATGAAGCTCAGCCACTATGGTGCACCTTCTTCAACTGGGAGCATGACGTCAGTTTCATCTACAAATACCCCAAGGTCGAGCCATTTTGACTTGTTTTGGTTAGAGCACAGCAATCCTTCTGAATCCGAGGATGTGCAACAGATGACTGACCTTGCGGACATTGCCCGTTGCGTAGCAAGCTTGGATCTTACAAAAGAAGGGGCTTCTGAGTATTTGCTTGCATGCATGCATGATTTACAGGATATTTTACAGCATTGCAAGCTCAAAGCTCTTGTAATAGACACATTTGGAAGCCGCGTAGAGAATCTTCTAAGGGAAAAGTATGTACTTGCTTGTGAGGTGATGGATAGCAGAAGTCCTAAGGATTTGAGCAAATATAATGAAGGCATTGGATGCTTGGTGGATAGTGCATCTCAGAATAATACAATGTTAACGCCTTTACATCCCACACATAAAGCAGGAACTAGCATTGATGACTTCGAGATTCTGAAACCAATTAGCAGAGGTGCCTTTGGTAAAGTCTTTCTTGCGCGAAAGCGAACGACAGGAGATCTATTTGCAATAAAGGTACTCAAGAAATTGGATATGATACGAAAAAATGATATTGAGCGTATATTAGCAGAGCGTAACATATTAATCACAGTCAGAAACCCATTTGTGGTCAGATTCTTTTATTCATTCACCTGCAGGGATAACCTTTATTTGGTTATGGAATATCTCAATGGAGGTGATCTATACTCCTTGCTTAGAAAAGTCGGTTGCTTGGAGGAAGATGTAGCTCGTATCTACATTGCTGAACTGGTTCTTGCTTTGGAATATCTCCACTCCCTGGGAATAGTGCATCGTGATCTGAAGCCAGACAACATATTGATTGCTCACGATGGGCACATAAAGCTTACAGATTTTGGACTATCAAAAATTGGTCTTATCAATAGCACAGTTGACTTGTCTGGATCTGAGACAAATGATAGTGCTCTATTAGATGCCCATGACGTGCAGACTTTTGAACATACTCAACAAACAGAGGAGAGAAGTCGGCGGTCAGCTGTTGGCACACCTGACTATTTGGCACCTGAAATCCTTCTCGGAATTGATCATGGTTATGCTGCAGACTGGTGGTCAGTGGGAATTATCCTATTTGAGTTTATAACTGGAATTCCACCTTTCACTGCTGAACGTCCTGAGATAATCTTCGACAACATACTTAACAAGAAAATCCCTTGGCCTGCCGTTCCTATTGATATGTCTTATGAGGCCCAAGACTTGATTAACAGGTTCCTTATTCATGGTCCAGATCAGCGCTTGGGAGCAAATGGAGCATCAGAGGTAAAAGCACATCCTTTCTTCAAGGGAGTCAACTGGGACACCCTTGCCTTACAAAAGGCTGCCTTCGTGCCAAACCCTGACAGTGCAGATGATACAAGCTATTTTATGTCACGATATTCTCAAATTTCTAATGGAATATCAGAAGATCATAATTTTAGTGATTCTTCTTCTGACACAACTGATTCTTGCTCAAATTCTGGACTTGAGATGGATGAATGTGGTGACTTGGCTGATTTCAACTTTTCTCCTCTAAATCTCTCATTGATTAATTTCTCTTTCAAGGTATGCTTGTTCATCCCCAGTTCGAGTTATAAAGTGCATTTGATAAAATTTTGTACCCCAATAATGTATCTGTCATTCTTCTATTGTTGCAAAAATGTGAGTTTCTTTCAAACATTCTGTCTATACCCTTAA 3381 0.4247 MEETGRNFGGDFSAETGIPSGLNRIKTRRGPPKKDRLSSRSEDSATVSGGVPRPPLAEQKTERNGHGKITDSKEGLRKGKKIARWFTSYLTKDSDQASTNVPQNTEVDNPEVTMLGKEGFVGDKLSTRNESSPESFRTRKVPKVLKSFSHELGPKGGIRPAHTRAHSYNDLKELLGSLRSRFDTAKVVVNAELANFAGDVVEVLERKGSSSPKGQKAAEDLLMLAQQCTEMPSTEFRAKCEGIVQDLAEKRHQCQAGLLKQLFTRMLFILTRCTRLLQFEKDSEPIDEDSLHKFKQCLESIPAVELSWVPKPSSVDFGSNDTLNQKDSSKHQSQGQNAAFPCSERTWCRYKEPSDESDTTLRKCSSALSQKHLSRNSQVGIQSSETSIITEYDSHSFSAPQRKKVEDSVQLRHQDRSFDGSDSVICRICEEVVPTSHLESHSYICAYADKCDLKCLDIDERLSKLAQILEQIVESCTSSCHASYGSPEISRLQSANSVVGSEGQSPKIIEWHSKGVEGMFEDLHEMDTACIDDSHLVTSSNLKGHLGMKLSHYGAPSSTGSMTSVSSTNTPRSSHFDLFWLEHSNPSESEDVQQMTDLADIARCVASLDLTKEGASEYLLACMHDLQDILQHCKLKALVIDTFGSRVENLLREKYVLACEVMDSRSPKDLSKYNEGIGCLVDSASQNNTMLTPLHPTHKAGTSIDDFEILKPISRGAFGKVFLARKRTTGDLFAIKVLKKLDMIRKNDIERILAERNILITVRNPFVVRFFYSFTCRDNLYLVMEYLNGGDLYSLLRKVGCLEEDVARIYIAELVLALEYLHSLGIVHRDLKPDNILIAHDGHIKLTDFGLSKIGLINSTVDLSGSETNDSALLDAHDVQTFEHTQQTEERSRRSAVGTPDYLAPEILLGIDHGYAADWWSVGIILFEFITGIPPFTAERPEIIFDNILNKKIPWPAVPIDMSYEAQDLINRFLIHGPDQRLGANGASEVKAHPFFKGVNWDTLALQKAAFVPNPDSADDTSYFMSRYSQISNGISEDHNFSDSSSDTTDSCSNSGLEMDECGDLADFNFSPLNLSLINFSFKVCLFIPSSSYKVHLIKFCTPIMYLSFFYCCKNVSFFQTFCLYP* 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00198 1126 CDD STKc_MAST_like 713 1001 - -
Eupl13g00198 1126 ProSiteProfiles AGC-kinase C-terminal domain profile. 997 1092 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl13g00198 1126 SMART serkin_6 707 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00198 1126 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672|GO:0006468
Eupl13g00198 1126 Pfam Protein kinase domain 708 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00198 1126 ProSiteProfiles Protein kinase domain profile. 707 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00198 1126 MobiDBLite consensus disorder prediction 317 338 - -
Eupl13g00198 1126 MobiDBLite consensus disorder prediction 59 77 - -
Eupl13g00198 1126 MobiDBLite consensus disorder prediction 1 77 - -
Eupl13g00198 1126 FunFam Microtubule associated serine/threonine kinase 2 791 1013 - -
Eupl13g00198 1126 PANTHER SERINE/THREONINE-PROTEIN KINASE 391 1042 - -
Eupl13g00198 1126 FunFam probable serine/threonine protein kinase IREH1 705 794 - -
Eupl13g00198 1126 Gene3D Phosphorylase Kinase; domain 1 704 1041 - -
Eupl13g00198 1126 Gene3D Transferase(Phosphotransferase) domain 1 787 1013 - -
Eupl13g00198 1126 SUPERFAMILY Protein kinase-like (PK-like) 704 1039 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00198 Eupl-Chr13 2713903 2732188 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00198 1 1099 AGC Kinase Gene Family AT1G45160 55.285 0.0 1085
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Eupl13g00198 Pkinase 1.6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00198 - - nnu:104595739 1595.87