Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00191 ATGGGGTCTGGGGAACAGAGTACACCTGCTAAGCCTTCCAAACCAATCACTTCAACACAGGAAACACCAATGACACCTTCATATCCTGAGTGGTCGACTCCTATGCAGGCATACTATGGTGCTGGAGCTAGTCCACCTCCCTTTTTCACCTCGACTGTCGCTTCTCCAACTCCCCATCCCTATATGTGGGGAAGCCAGCATTTAATACCACCATATGGGACCCCACTTCCATACCCTGCTTTATATCCTCATGGGGGACTTTATCCTCATCCTAACATGGCTGTGTCTCAGGGTGCAGCACTAACAACTACAGAGACGGAGGGTAAAGGTCTCAATGTAAAGGACCGGGTTTCAATGAAGAAATCCAAGGGAAGTTCGGGAAATATGGGTGAGGTTGTTGGCAAATCTGGAGAAAGTGGAAAGGCTGCGTCAGGTTCCGGAAATGATGGTGCCTCACAAAGTGCCGAAAGTGGAAGTGAGGGCTCATCAGATGCAAGTGATGAGAATGCTAATCAACAAGAATTTTCTGCAACTAAGAAGAGAAGCTTTGACCAGATGCTTGCAGATGGAGCAAATGCACAAAACAACAATGCTGCTCAATACAGTGGTGCACCTGTTGAATCATCTCTCAATGCAAGGGGACAACCTGCTGCAAACCTTCCAGTTTCCATGCCAGGGAAACTGGCAGGAACTATGCCTGGGACCAATTTGAATATTGGGATGGACCTTTGGAATGCATCTCCTGTTGGAGCTGTACCCTTGAAGGCGAGACCAAATGCATCCGGTGTCTCATCAGCAGTTTCTCCAGCCACAATGGTTGGACGTGAAGGAGTTGTATCTGACCACCCATGGATTCAAGATGAACGTGAACTAAAAAGACAAAGGAGAAAGCAGTCTAATCGGGAGTCAGCTAGGAGGTCAAGATTACGCAAGCAGGCGGAATGTGAAGACCTGCAAGTGAAGGTGGATTCATTGAGCACTGAAAATCACAATCTCCGTAAAGAGCTCGAGAGGCTTGCTGAGGAATGCGAGAAGCTCACAGCCGAAAATACTTCCTTAATGGAAGAGCTGACTCGATTGTACGGACCAGAGGCAATACCTACTCTCAAAGGTAACAAGACTGACACGTCGGTTCTCCAGTCCGTCAATGGTGAGGCAATGGCATCAAACAAGACACTTCAAGGGGAAGCAAGTTGA 1197 0.4795 MGSGEQSTPAKPSKPITSTQETPMTPSYPEWSTPMQAYYGAGASPPPFFTSTVASPTPHPYMWGSQHLIPPYGTPLPYPALYPHGGLYPHPNMAVSQGAALTTTETEGKGLNVKDRVSMKKSKGSSGNMGEVVGKSGESGKAASGSGNDGASQSAESGSEGSSDASDENANQQEFSATKKRSFDQMLADGANAQNNNAAQYSGAPVESSLNARGQPAANLPVSMPGKLAGTMPGTNLNIGMDLWNASPVGAVPLKARPNASGVSSAVSPATMVGREGVVSDHPWIQDERELKRQRRKQSNRESARRSRLRKQAECEDLQVKVDSLSTENHNLRKELERLAEECEKLTAENTSLMEELTRLYGPEAIPTLKGNKTDTSVLQSVNGEAMASNKTLQGEAS* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00191 398 MobiDBLite consensus disorder prediction 141 179 - -
Eupl13g00191 398 MobiDBLite consensus disorder prediction 196 216 - -
Eupl13g00191 398 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 295 310 IPR004827 GO:0003700|GO:0006355
Eupl13g00191 398 Gene3D - 291 345 - -
Eupl13g00191 398 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 375 IPR044827 GO:0003700|GO:0006355|GO:0043565
Eupl13g00191 398 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 290 353 IPR004827 GO:0003700|GO:0006355
Eupl13g00191 398 MobiDBLite consensus disorder prediction 1 31 - -
Eupl13g00191 398 MobiDBLite consensus disorder prediction 105 179 - -
Eupl13g00191 398 FunFam BZIP transcription factor 290 341 - -
Eupl13g00191 398 SUPERFAMILY Leucine zipper domain 291 347 IPR046347 GO:0003700|GO:0006355
Eupl13g00191 398 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Eupl13g00191 398 MobiDBLite consensus disorder prediction 289 316 - -
Eupl13g00191 398 Pfam bZIP transcription factor 288 350 IPR004827 GO:0003700|GO:0006355
Eupl13g00191 398 Pfam Disordered region downstream of MFMR 115 253 - -
Eupl13g00191 398 MobiDBLite consensus disorder prediction 196 218 - -
Eupl13g00191 398 SMART brlzneu 288 352 IPR004827 GO:0003700|GO:0006355
Eupl13g00191 398 CDD bZIP_plant_GBF1 293 343 IPR045314 GO:0003700|GO:0006355
Eupl13g00191 398 Coils Coil 315 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00191 Eupl-Chr13 2631097 2641251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00191 1 372 bZIP Transcription Factor Family AT4G36730 48.257 2.74e-97 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl13g00191 MFMR_assoc 6.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00191 K09060 - nnu:104588181 517.309