Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00157 ATGGGTTGGCTGGAAAAAAAATTTAGTGTTTCCAGCCATAAAATCTGGGCAGGGCAATATCATGGGAAATATGAAGAAGACAGAGTCTGGGATCCTTCTAATTCGGTGGATGCATTGTTCGGGTATGAGAATGAAGATACAGATCGTGCTACTGCGTTTTCCCTCTCAGAAGAAGAGCAAAAAGGGAAAAATGTGATCGATAATGAGTCTTATTTGGAGAATGATGAACAACTTGCCAGAGCTCTACAAGAAAGTTTGAACATTGAGTCCAGGATTTGTGCTGGTTGCAATAATGAGATTGAACATGGACATTTTCTGAGTCGCATGAGTGCAGATTGGCATCCAGAATGTTTTCGTTGTCATGCTTGCAATCTGCCTATTCACGATTATGAGTTCTCCATGTCTGGAAATTACCCTTATCATCAATCTTGCTATAAGGAGCAAAATCACCCAAAATGCGAAGTCTGTATGCGCTTTATTCCAGCCAATTCTGCTGGTAAATTTGAATATAGCATGCATCATTTTTGGAACCAAATTTACTGCCCCTCGCATAAGCATGATGGGACTCCACGGTGCTGTAGCTGTGAACGAATGGAGCCAAGAAACACAAAGTACGTTTCCCTGGATGATGGTCGGAAGACCTGCATGGAGTGTCTGGCCTCTGCAATATTAGATACGATCGAATGCGAACCCCTTTACATTGAAATACAAGAGTTTTATGAAGGTTTAAATATGAAAGTGAAGCAGCAAATTCCGTTACTCTTGGTTGAGAGAACAGCACTAAATGAGGCCATGGATGGAGAGAACGGTAATCATCACATGCCTGAGACTAGAGGGATCTGCATGTCAGAGGAACAAACAGTCAGCACTATCAGAGGAAGGCCAAGGATTGGGGCAGGAAATAAAATCAAGAACATCAGAACAGAGCCGATTAGGCTTACCCGCGTTTACGAAGTAACAGCCATTCTCATTTTGTATGGACTCCCTAGATTGCTAACTGGTACGATCCTGGCTCATGAGATGATGCATGCATGGCTGCGGCTTAATGGTTACCGTTCTCTTCCTCTAGATGTTGAAGAAGGTATCTGCCAGGTGCTAGCGCACATGTGGCTGGATTCAGAGATCATGTCAGGGTCCGGTAGTAATGTTGCTTCAACTTCCTCATCATCCTCTTCTTCTGCATCATCAAAGAAGGGTTGCCGGTCTGAATTCGAGAAGAAGCTTGGGGAGTTTTTCAAACAACAGATTGAATTGCATCCTCTACCGACATACGGAGATGGATTCAGAGCTGGTAACCGGGCCGTGCTCAAGTACGGTCTCTGGCAGACCCTCGAGCATATTCGGTTGACAAGGAGCTTCCCATACTGA 1368 0.4423 MGWLEKKFSVSSHKIWAGQYHGKYEEDRVWDPSNSVDALFGYENEDTDRATAFSLSEEEQKGKNVIDNESYLENDEQLARALQESLNIESRICAGCNNEIEHGHFLSRMSADWHPECFRCHACNLPIHDYEFSMSGNYPYHQSCYKEQNHPKCEVCMRFIPANSAGKFEYSMHHFWNQIYCPSHKHDGTPRCCSCERMEPRNTKYVSLDDGRKTCMECLASAILDTIECEPLYIEIQEFYEGLNMKVKQQIPLLLVERTALNEAMDGENGNHHMPETRGICMSEEQTVSTIRGRPRIGAGNKIKNIRTEPIRLTRVYEVTAILILYGLPRLLTGTILAHEMMHAWLRLNGYRSLPLDVEEGICQVLAHMWLDSEIMSGSGSNVASTSSSSSSSASSKKGCRSEFEKKLGEFFKQQIELHPLPTYGDGFRAGNRAVLKYGLWQTLEHIRLTRSFPY* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00157 455 ProSiteProfiles LIM domain profile. 91 151 IPR001781 -
Eupl13g00157 455 CDD LIM_DA1 93 145 - -
Eupl13g00157 455 ProSitePatterns LIM zinc-binding domain signature. 93 127 IPR001781 -
Eupl13g00157 455 Gene3D Cysteine Rich Protein 81 151 - -
Eupl13g00157 455 SMART lim_4 92 144 IPR001781 -
Eupl13g00157 455 Pfam LIM domain 93 147 IPR001781 -
Eupl13g00157 455 Pfam Protein DA1 242 450 IPR022087 -
Eupl13g00157 455 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 88 118 - -
Eupl13g00157 455 PANTHER PROTEIN DA1-RELATED 2 3 455 IPR045218 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00157 Eupl-Chr13 2149432 2165803 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl13g00157 DA1-like 2.4e-93 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00157 - - nnu:104595787 699.123