Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00148 ATGGAAGTGCTGTCGTGTTCGGATGTCCATTATGTCGGAGAATCTAATTGCCCACAACAGAGTTCCAGTACAAATTTTCTGTGCAGTGGAGAAACCAAGTGCCTTGAACATGGGAAGCAGGTTCTGGTACCCGACATTACACATAAAGTGGATGACCTCGTGGTAAATGTAGAATGGCCTCAAAATGATCGATCGGGTGAAGATCAAGAGAGAGTAGATGGACCACCGACTTTAGAAGGCGTCTGCAATGGAACTTCAGATCCTGAACGTACGGTAGAGGGGCAAGAGTTGCCTCATAACTTGGATGATTTTCAAATGGATAGCTTGAATTCTCAGAAGCAAAACACTGAACCTTGCATGGCCCCCAAGAACTCATATTCATGTGTGGATAAAATTGAAGGTGATCTGCCAAGTAGCAACTGGGATGGAGAATCCCGTCTTCTGAAAGCCGAGTGTTCAGAGCAAGATGAAACTGTGGCATTGTGGGTGAAGTGGAGAGGAAAATGGCAGGCAGGCATCCGATGTGCAAGGGCTGATTGTCCACTATCAACTTTGAAAGCGAGGCCTACACGTGATAGGAAAAAGTATTTTGTGGTATTTTTTCCCCACACAAGGAATTATTCATGGGCCGATATGCTACTTGTTCGTTCAATCCATGAGTTCCCAGAGCCTATTGCACATAGAACACATTATAGAGGAGTAAAAATGGTCAAAGATTTGAGCTTTCCACACCGCTTTATCATGCGAAAGCTTGCTGTTGGCATGGTGAATATCAGTGACCAACTACATAATGAGGCGGTGATTGAGAGTGCTCGCCAGGTAACAGCCTGGAAGGAATTTGCTATGGAGGCTTCCCGTTGTAAAGGTTATCCGGATCTTGGAAGGATGCTTTTAAAGCTTCAGAGTATGATATTGCAGCGCTACATAGATCCTGATTGGCTACAGCATTCTTTTGACTCTTGGGTACAACATTGTCAGAATGCACAAAGTGCCGAATCTGTTGAAACGCTGAAGGAGGAATTATTAAATTCCATATTGTGGAATGAAGTTGAAGCACTCTGGGATGCACCGGTGCAGCCTGAGTTGGGCTCCGAGTGGAAGACTTGGAAGCAGGAAGTTATGAAATGGTTTTCGACATCACACCCCATAGCTAGTGGTGGAGACGTAGAACAGCAATACAGTGACGATCCTACGAATGTGGGTCTCCAAATTAGCAGGAAACGGCCTAAGCTTGAAGTTCGTCGTGCAGAGGTGCATGCTTCACAAGTCAAAGCCAGTGGTTCACAAGAGGTCCACCCTCAGACTAACACCGTTAAGATTGAAGCCAGACTTTTTAGTAGTCAAGGCCTTGGGAATGCTGTTACAGTGGTAACCGAAACTTGTAAAGACACAGCTTTTACTGAGGGAGCTACACCATCTGAGTATCCAGGTAGCGTGGCCGACAGATGGGACAAAATTGTAGTTGAAGTGGGAAATCCCGAGTTCATCCAAACCACAGATGTGGAAGAGACACCTGCAGATGGATGGAGTGGTAGTAAACCTTTAGATTCTGGGCATAAGTACCGCCAATGCTTGGCTTTTATTGAAGCTAAGGGAAGGCAGTGTGTAAGGTGGGCAAATGATGGTGATGTTTACTGTTGTGTGCATTTGGCCACTCGTTCTCTTGGCAAAACTGCAACGGCGGAACAAACTCCCCCTGTTGATGCTCCAATGTGTGAAGGAACCACCACTCATGGTAAGAAATGTAAGCATAGGTCTCAAAATGGATCCCCATTTTGCAAGAAGCACATACCTCAGAGAAACCAGTATTTGATGAATACGGAAATGCCATCAAGTTCACCAGGGAATACGGTTAAGAGGAAGCACATAGAGATGATTTCTAGGACAGAAACTGCATATTGCAAAGAAATAATTTTGGTGGGAGATGTTCAAAATCCCACCCTAGAGAACTCAGTCTCCGTAAAGGAGGGAGAAACCTTGGAAATAAAAAAATCGGAGGATTCCATTAAAGGCCATAATAGTGCAGAGTTACTGCATTGCATAGGATTGTTCCACCAGAATAATAATGATCCGTGTCTAGACCGTGCAAAACTGCACTCACTGTACTGTGAAAAACACCTTCCAAGCTTTCTTAAACGTGCAAGGAATGGTAAGAGTAGAATAATATCAAAAGAAGTCTTCATTAATCTTTTGAGAAGTTGCAGCTCGCAAAAGCAAAAATTGCATTTACATCGAGCGTGTGATCTTCTTTACGGGTTCATTAAAAGTATCCTATCCCGTCGCAACCCAGTTCCTAGGGAAACCCAGCTCCAATGGATCTTATCTGAAGCTTCTAAAGATTTTTGTGTTGGGGAATGCCTAATGAAGTTGATTTCCTGTGAAAGAGAGAAACTCAGGAGGCTTTGGGGCTTTGACGTTGACAAAGATGAGCCAGTTTCCTCCTCTGGTGTGGACCAATCAGTGTTTATGCCAGTGGCTCATGAGAGCAGCCATAAAATCCAGAAGACTGTTAGATGCAAGATTTGCATAGAGGAGTTCTCCGATGACGAAGTGCTCAGCACCCATTGGATGAACATTCACAACAAGGAAGCGCAATGGCTGTTCAGAGGGTATGCATGCGCAATCTGTATGAATCCATGTACTAACAAGAAAGTTCTCGAGACTCATGTGACGGAGAGACATGGTGTGCAATTTCTTGAACAATGCATACTGCTCCAGTGTATACCTTGTGGTAGCCATTTCATTAATCCGGAACAGTTATGGTTGCACGTCCTCTCAGTTCACTCCAAGGATTTCAAGATGCCAACTGTTTCTCAGCAGCACAACCTGTCTTCAAGCCAAGCTTCTCAACAGAAGCTTTATCTAATTAATAATGATGCCTCAGAGAATAATCCTGAGAGTAAAGGTGGGTCTCAGAGGTTCATTTGTAGGTTCTGCGCGTTGAAGTTTGATCTCTTACCGGATCTTGGGCGCCACCATCAAGCTGCTCATATGGGTCCAAATTTAATCAGCCGTTTTTCCCCAAAAAGAGAGAACCATCTCAATCCTTACAAATCAAAATCGGGCAGATTCAGCCATCCTGGATTTAAAAAAGGTCTTGGAGCAGCGTCATATAGGTTCAGGAAGAGGGGTAATTTAAGAATGAAGAAGCTCTTTCAGGCATCAAGTTCAGTTTGCACCGGGGAAGTGCGAGTGCAGACTCAGGTAGCTGAGGTGGTAGGTCTCGGTAGATTGGTAGAATCTCAATGTTCAGCTGTTGCAAAAATTTTGTTTTCTGAGATTCAGAAAACATTACCTCGGCCAAGTAACCTAGACATTCTTTCTGTTGCTCGCTCCACTTGCTGCAAGGTAAGCCTCGAAGCTGCACTGAAGGAGCAATACGGAGTATTGCCGGAACGTCTGTATCTGAAGGCAGCCAAATTCTGCAGTGAGCTAAATATTCAAGTGGAGTGGCACCAAGAAGGGTTTATCTGTCCTAAAGGATGTAAACCTGTCACAGACCCCCATATTTTATCTCCCTTGGGGCCTCTCCCAAGTGGTTTTATGGAACTTCCATTGGCAAAGTTGGCAGATCCTGTGAATGATGAGGAGTGGGAAATGGATGAATGCCACTATATAATCGAATCATGGCATATCCATTCGAACCCCATGCAAAAATCCATTGTCCTGTGTGAAGATGTAAGTTATGGACGCGAATCAGTTCCAGTAACCTGTGTAGTAGATGGGGATCTTGTGAGTTCCCTCCAAATCATTAAAGATGAAGGATCCATGGGCAGAAAAACCTGTTATGCCATGCCTTGGGAGGGTTTTACCTATGTTACAGAGAGGTTGCTTGATCCATCCCTTGGTCTTGATACGAAGAGTTTGCAGTTGGGGTGTGCTTGCCCACATTCAACCTGCTCTCCTGAAGCATGTGATCATGTCTACCTCTTTGACAATGACTACGAAAATGCAAAGGATATTTATGGTAAACCAATGCATGGGAGATTTCCATATGATGAAAAAGGTCGAATCATCTTGGAGGAGGGTTACCTAGTCTATGAGTGCAACTCCATGTGCAGCTGTGACAGAACTTGTCGAAATAGAGTTTTGCAGAATGGGGGGCAAGTCAAACTGGAAATCTTCAAAACAGAGAACAAGGGTTGGGCAGTCAGAGCTGGTGAAGCAATCTCCCGTGGAACATTTGTGTGTGAGTACATCGGGGAGGTTTTAACCACACAGGAGGCGAACAAGAGGGGAGAGAGGTATGAAAATGAAGGTTGTGGCTATTTGTATGATATTGGTGCTCATATCGATGAGATGGGTGGACTAACTGAAGGAGTGGTCCCGTATGTGATTGATGCCACAAGATACGGGAATGTTTCACGGTTCATCAATCAGAGTTGCTCGCCCAACCTTGTTAATTTCCAAGTTCTGGTGGAGAGCATGGATTGCCAACTTGCACATATTGGTCTCTATGCAAAGCGCGATATTTCTGTAGGCGAAGTACTGGCATATGACTACCACTACAAGCTACTACCTGGAGGAGGATGCTCTTGTGATTGCGGTGCTCCTGACTGCAAGGGCCATGTGTACTAA 4578 0.4469 MEVLSCSDVHYVGESNCPQQSSSTNFLCSGETKCLEHGKQVLVPDITHKVDDLVVNVEWPQNDRSGEDQERVDGPPTLEGVCNGTSDPERTVEGQELPHNLDDFQMDSLNSQKQNTEPCMAPKNSYSCVDKIEGDLPSSNWDGESRLLKAECSEQDETVALWVKWRGKWQAGIRCARADCPLSTLKARPTRDRKKYFVVFFPHTRNYSWADMLLVRSIHEFPEPIAHRTHYRGVKMVKDLSFPHRFIMRKLAVGMVNISDQLHNEAVIESARQVTAWKEFAMEASRCKGYPDLGRMLLKLQSMILQRYIDPDWLQHSFDSWVQHCQNAQSAESVETLKEELLNSILWNEVEALWDAPVQPELGSEWKTWKQEVMKWFSTSHPIASGGDVEQQYSDDPTNVGLQISRKRPKLEVRRAEVHASQVKASGSQEVHPQTNTVKIEARLFSSQGLGNAVTVVTETCKDTAFTEGATPSEYPGSVADRWDKIVVEVGNPEFIQTTDVEETPADGWSGSKPLDSGHKYRQCLAFIEAKGRQCVRWANDGDVYCCVHLATRSLGKTATAEQTPPVDAPMCEGTTTHGKKCKHRSQNGSPFCKKHIPQRNQYLMNTEMPSSSPGNTVKRKHIEMISRTETAYCKEIILVGDVQNPTLENSVSVKEGETLEIKKSEDSIKGHNSAELLHCIGLFHQNNNDPCLDRAKLHSLYCEKHLPSFLKRARNGKSRIISKEVFINLLRSCSSQKQKLHLHRACDLLYGFIKSILSRRNPVPRETQLQWILSEASKDFCVGECLMKLISCEREKLRRLWGFDVDKDEPVSSSGVDQSVFMPVAHESSHKIQKTVRCKICIEEFSDDEVLSTHWMNIHNKEAQWLFRGYACAICMNPCTNKKVLETHVTERHGVQFLEQCILLQCIPCGSHFINPEQLWLHVLSVHSKDFKMPTVSQQHNLSSSQASQQKLYLINNDASENNPESKGGSQRFICRFCALKFDLLPDLGRHHQAAHMGPNLISRFSPKRENHLNPYKSKSGRFSHPGFKKGLGAASYRFRKRGNLRMKKLFQASSSVCTGEVRVQTQVAEVVGLGRLVESQCSAVAKILFSEIQKTLPRPSNLDILSVARSTCCKVSLEAALKEQYGVLPERLYLKAAKFCSELNIQVEWHQEGFICPKGCKPVTDPHILSPLGPLPSGFMELPLAKLADPVNDEEWEMDECHYIIESWHIHSNPMQKSIVLCEDVSYGRESVPVTCVVDGDLVSSLQIIKDEGSMGRKTCYAMPWEGFTYVTERLLDPSLGLDTKSLQLGCACPHSTCSPEACDHVYLFDNDYENAKDIYGKPMHGRFPYDEKGRIILEEGYLVYECNSMCSCDRTCRNRVLQNGGQVKLEIFKTENKGWAVRAGEAISRGTFVCEYIGEVLTTQEANKRGERYENEGCGYLYDIGAHIDEMGGLTEGVVPYVIDATRYGNVSRFINQSCSPNLVNFQVLVESMDCQLAHIGLYAKRDISVGEVLAYDYHYKLLPGGGCSCDCGAPDCKGHVY* 1526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00148 1525 ProSiteProfiles SET domain profile. 1370 1502 IPR001214 GO:0005515
Eupl13g00148 1525 Pfam Zinc finger C2H2-type, 3 repeats 873 998 IPR040689 -
Eupl13g00148 1525 SMART c2h2final6 905 928 IPR013087 -
Eupl13g00148 1525 SMART c2h2final6 837 860 IPR013087 -
Eupl13g00148 1525 SMART c2h2final6 871 894 IPR013087 -
Eupl13g00148 1525 SMART c2h2final6 974 997 IPR013087 -
Eupl13g00148 1525 Gene3D Classic Zinc Finger 822 897 - -
Eupl13g00148 1525 ProSitePatterns Zinc finger C2H2 type domain signature. 976 997 IPR013087 -
Eupl13g00148 1525 ProSiteProfiles Pre-SET domain profile. 1291 1367 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl13g00148 1525 ProSitePatterns Zinc finger C2H2 type domain signature. 839 860 IPR013087 -
Eupl13g00148 1525 ProSitePatterns Zinc finger C2H2 type domain signature. 907 928 IPR013087 -
Eupl13g00148 1525 Pfam Pre-SET motif 1229 1362 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl13g00148 1525 ProSiteProfiles Zinc finger C2H2 type domain profile. 837 865 IPR013087 -
Eupl13g00148 1525 SMART set_7 1370 1508 IPR001214 GO:0005515
Eupl13g00148 1525 MobiDBLite consensus disorder prediction 59 90 - -
Eupl13g00148 1525 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1525 - -
Eupl13g00148 1525 SUPERFAMILY SET domain 1213 1513 IPR046341 -
Eupl13g00148 1525 Gene3D SET domain 1204 1505 IPR046341 -
Eupl13g00148 1525 ProSiteProfiles Zinc finger C2H2 type domain profile. 974 1002 IPR013087 -
Eupl13g00148 1525 Pfam SET domain 1381 1501 IPR001214 GO:0005515
Eupl13g00148 1525 SMART preset_2 1224 1354 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00148 Eupl-Chr13 2040311 2064493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00148 140 1522 C2H2 Transcription Factor Family AT2G23740 49.893 0.0 1312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl13g00148 Pre-SET 4.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00148 - - nnu:104587396 2108.18