Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00125 ATGATTCTAAACATCCGATATCTCGTTCTTGTCTTTGCGATTTTCATCCTCTCCTTAATCTCCACTCAAGCGTCGACGGGTTGCAACCGATCCTGCCTCGGCGCCACACTGAGTCCCGTCCCGTTCCCGTTCGGATTCTCTGATGGCTGCCAAATCCGTCTAAATTGCAGCAAAGGACGCATCCTCATCGGCGAATTTCGAGTCCAAAACGTGACTTCAGACAGTGTCTCAGTCAACCTGCCGCCTAAATGCAACCGTTCAATCCAAACCTTGGAACCGCTCTTCAATCGGAACTACGCGCCGACGTCGCAAAACGGGCTATTGTTACATAACTGCAAGTCCAACCTCAAGGAATGTGTAATACCGATGGCCCTGTTGGACTCTCAGTTCGACTTTAAGGGATGTGATCACCCTAACTGCTTTTCGAATGAGGAAAAAAAAGGGGAGAAGGGTTTCATCACTTTTGCTGACGTGAGCCAGAGCGGTTGTGAATTCGTGTTCTCTTCAGTCGCCGTCGATGCTGCCATTAAGAACTCCTCGTATTCGCTCGATTTTCAAACGGTTCAGTTGGGGTGGTGGTTAGAAGGGGAGTGCCAGTGTTCTGAGAACGCGAATTGTACGAAGGTCGTGTCGCCGTTCAATATAAAGCAAGGATTTCGGTGTCGGTGCTTAGACGGTTACAAAGGAGATGGTTTCTTAAACGGCCAGGGTTGCCGGGAAGTGAGCCATTCCAAATGCAATCCTACCAAATACCTGTCTGGCCAATGTGGAGGAACTACTAGAGTTGGTGCTCTAATCGGAGGAGTCGTTGCTGGAGCTGCTTTAATGGCGGGTCTGGCTTTTCTCTGCTACTTAATCAGACGGCGTTCATTTTTGAAATCACAAAAGAGCACCAAACGGCTACTATCGGAAGCTGCAGGCAGCTGCAGTGTCCCATTCTATACCTACAAAGAAATCGAGAGAGCCACGTCTGCCTTCTCAGAGAAACATAGGCTTGGAACTGGGGCCTATGGAACAGTTTACGCAGGAAAAATCCACAATGATCAGTGGGTCGCCATAAAAAAGATCAGACATCGGGACACAGATGGCATTGAGCAAGTCATGAACGAGATCAAGCTCCTCTCGTCTGTGAGTCACCCAAAGCTAGTCCGCCTCTTAGGTTGCTGTATAGAGAAGGGTGAACAGATCCTTGTCTATGAGTTCATGCCTAATGGCACTCTATCTCAGCATTTACAGAAGGAGAGAGGAACTGGCCTCCCTTGGACAATTCGCCTCACCATTGCCACTGAAACCGCTCAAGCCATTGCCCATCTCCACTCTGCCATGAACCCGCCGATATACCACAGAGACATCAAATCCAGCAACATACTCTTAGACCATAACTACAACTCAAAAGTCGCGGATTTTGGTCTTTCTAGACTTGGTATGACTGAGACGTCCCACATCTCAACGGCCCCACAAGGGACTCCAGGGTATCTTGATCCTCAATACCATCAGAATTTCCATCTTTCTGATAAAAGTGATGTTTACAGCTTTGGGGTAGTTCTCGTGGAGATCATAACTGCACTGAAGGTGGTGGACTTCTCGCGGCCCCAGAGCGAGGTGAATTTGGCTGCGCTTGCCATAGAGAAGATCGGAAAGGGTTGTGTGGATGAGATAATAGATCCACTCCTTGAGCCACATAGGGATGCTTGGACCCTTTCATCTGTGCACAAGGTGGCTGAGCTAGCATTTAGATGCCTTGCCTTTCACAGGGACATGAGGCCTTCAATGATGGAAGTGGCAGCTGAGCTAGAACAAATCATGCTCAGCGGGTGGGCTCCTTTAGAGGAGAACATCTGTGTGGCATCCTCTTGCTCGTCTCCATCAAATAATGGAAGTGAGAAATCGCAAGGGGTGATAGCTAAAAAAGTGGGGGTGGTGAGTCGGAGATTGATTGTACCGCAGAAGGGCGATTTTGTGATTTCGACCGAGGATGTGAAGGATAGCTCCCCCAGTTCTGTGCAGGACCCATGGCTCAGTGAACAAAGTTCACCTTCAACAAACAGCTTGTTAGGTAATGTAATTCACTGA 2073 0.4872 MILNIRYLVLVFAIFILSLISTQASTGCNRSCLGATLSPVPFPFGFSDGCQIRLNCSKGRILIGEFRVQNVTSDSVSVNLPPKCNRSIQTLEPLFNRNYAPTSQNGLLLHNCKSNLKECVIPMALLDSQFDFKGCDHPNCFSNEEKKGEKGFITFADVSQSGCEFVFSSVAVDAAIKNSSYSLDFQTVQLGWWLEGECQCSENANCTKVVSPFNIKQGFRCRCLDGYKGDGFLNGQGCREVSHSKCNPTKYLSGQCGGTTRVGALIGGVVAGAALMAGLAFLCYLIRRRSFLKSQKSTKRLLSEAAGSCSVPFYTYKEIERATSAFSEKHRLGTGAYGTVYAGKIHNDQWVAIKKIRHRDTDGIEQVMNEIKLLSSVSHPKLVRLLGCCIEKGEQILVYEFMPNGTLSQHLQKERGTGLPWTIRLTIATETAQAIAHLHSAMNPPIYHRDIKSSNILLDHNYNSKVADFGLSRLGMTETSHISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPQSEVNLAALAIEKIGKGCVDEIIDPLLEPHRDAWTLSSVHKVAELAFRCLAFHRDMRPSMMEVAAELEQIMLSGWAPLEENICVASSCSSPSNNGSEKSQGVIAKKVGVVSRRLIVPQKGDFVISTEDVKDSSPSSVQDPWLSEQSSPSTNSLLGNVIH* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00125 690 Pfam Protein kinase domain 327 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00125 690 ProSiteProfiles Protein kinase domain profile. 326 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00125 690 MobiDBLite consensus disorder prediction 658 690 - -
Eupl13g00125 690 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 673 IPR044652 GO:0004672
Eupl13g00125 690 FunFam Wall-associated receptor kinase-like 14 293 401 - -
Eupl13g00125 690 MobiDBLite consensus disorder prediction 659 690 - -
Eupl13g00125 690 Gene3D Transferase(Phosphotransferase) domain 1 402 606 - -
Eupl13g00125 690 Gene3D Laminin 193 239 - -
Eupl13g00125 690 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Eupl13g00125 690 FunFam Wall-associated receptor kinase-like 20 402 611 - -
Eupl13g00125 690 Gene3D Phosphorylase Kinase; domain 1 288 401 - -
Eupl13g00125 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Eupl13g00125 690 SMART serkin_6 326 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00125 690 SUPERFAMILY Protein kinase-like (PK-like) 303 599 IPR011009 -
Eupl13g00125 690 ProSitePatterns Protein kinases ATP-binding region signature. 332 355 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00125 Eupl-Chr13 1791985 1797736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00125 1 688 Receptor kinase-like Gene Family AT2G23450 57.244 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Eupl13g00125 Pkinase 7.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00125 - - ming:122074921 948.347