Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00118 ATGCATTGGTGGCAGAGTTCATTTTCTTCTCCATCTTCCTCCTCTTCGTCTCCCAAATCCTCCTTTGAAAAACGCAATATCTGGGACATTGATCTATTCAGGATCCGTCGGGGAGCGCATAAGCAGCCGCGGCTGACGCGACAGCGGAAGCTTCGGCATCTGCCCTTGAACCGTCAGCTCCATCCAGCCACCAATTCACCACCATCGTCGTCGTTGCCGTCGCCGAAATATCTGGACCACGGCTCGGCTCGGACGTCTTCGGCGGTGCCGCAGCCGTTGCCACGGCCGGAATCGTCTTTGTTTCTTCGTCGGGATCCGGTACTATTGTCTTTGAATTCGGTTGATTGTCCTCTCCCTTCCCCCAAGGAGAAGCCGAGCAGAAGGGAGGGAGAGGAGGGCGATAAAATAGATTCTCTGATTGGAGATTGCACAAGAGAGGGGAATCTGTCGAGCTCTACGATAGGGAGCAGGAGACATGTTCACCAAGCCATCCACAAGAATGCAGACTATGATGATACATGGCTGGTAAAATCTCCGACCAATCGTGGTAGGGAGGTGCTTCGAGATCCAAATGGCATTGAAAATGTTCACACTAACTTCTGGCTGAATGTTCCTGCTAAGAGTGCTCCAACCAGTGGTTTCTCAAGTCCTGCACTTAGCCCTCGAAGATTGAGTACAGGGGATTTTTTCCCCTCTTCTCACATTGCTTCTCAAGGATTTCAGGTTTGGTCTTCCCCAGAGTTCCCAGTCTCAGATATGCTTACAGGCTTCTCTTCCCAAACGTCACCAGATAAAACCATGTCCAGTCCTGACCGCTCTCCACTCCAAAGTCCGACTGTAAAAAGTCCTAGACTAAATCCTAAAAGTCCAAGGGCTTCTCCGTTGCATCACAAGTTGTCCCCAGAGAGCTCTACAGCTTGGCATGACAGTAGTGGTCATGTCACTGTCCACCCACTACCCCTTCCTCCAGGAGCTGCAATACATTCACAGCCAGCTTTCGTTCATCAAATTACAGCAAAACCGGAGGTATCATCAATGACAAGTCAATGGAAAAAAGGAAAGCTTATTGGACGTGGTACATTTGGAAGTGTTTATGTTGCCAGCAACCGGGAAACTGGAGCTTTGTGTGCAATGAAAGAAGTTGATCTAATTCTTGATGACCCCAAATCTGCTGAATGTATAAAGCAATTGGAGCAGGAAATTAAAGTTCTTAGCCAATTAAAGCATCCAAATATTGTACAGTATTATGGCAGTGAAATAGTGGAGGACCACTTCTATATTTATTTGGAGTATGTTCATCCTGGATCAATTGATAAATATGCCCGCGAACATTGTGGAGCTATTACTGAATCTGTGGTTCGCAATTTCACCCGTCATATTCTCTCTGGGTTGGCTTACTTGCATAGTACAAAGACGATACACAGGGACATTAAAGGGGCAAATTTGCTTGTTGACGCATCTGGCGTTGTTAAGCTTGCTGATTTTGGGATGGCAAAACATCTTAGTGGACATGCAGCTGTACTTTCTTTGAAGGGAAGTCCATACTGGATGGCCCCAGAGGTCATACAGTCTGTCATGCAGAAAGACACTACTAGTGATCTTGCTCTTGCTGTTGACATTTGGAGTTTGGGTTGTACTATTATTGAGATGCTGAATGGGAAACCTCCTTGGAGTGAGTTTGAAGGGGCTGCAGCTATGTTTAAGGTTTTGAATCAATCTCCACCTATACCAGAAACACTATCATCAGCAGGCAAGGATTTCCTGCAATGTTGCTTTCGAAGAAATCCTGCAGAGAGGCCATCGGCAAGCACGTTGCTAGAGCATCGTTTTTTAAGAAACTCTCACCATCTGGAAGTTTCATCATGCGCAGAGTTATTTTCTGGAATGAAACTGGTGGACGTAGTGCATAGTCCAAGAGAGTGGACTAAATATAAGGTTGAATCAATGCCGATGTCTTCACACGCACAGACCAGAAAAGGAAAACTGGCTTCTAATGGTGAGCCTGGTCAACAACCTCATCCTGAAACTTCCGACTCCGCAGCAGCCTCCTGTAATTCTCCTCGTTCTACCCTTGAGGCCCTTCCTGGTTTATCTCCTCCGCATTCGAATCGCAGCATGCATAATTCTTGCCCTTCTCCAAATGGTCTCGATGTTATACACCTGCATTCTGGGAACAGCGGTCCTCGTCCTAGGACTCATGGAAAGGAAGTCCCACACCTTTTCTGA 2226 0.4695 MHWWQSSFSSPSSSSSSPKSSFEKRNIWDIDLFRIRRGAHKQPRLTRQRKLRHLPLNRQLHPATNSPPSSSLPSPKYLDHGSARTSSAVPQPLPRPESSLFLRRDPVLLSLNSVDCPLPSPKEKPSRREGEEGDKIDSLIGDCTREGNLSSSTIGSRRHVHQAIHKNADYDDTWLVKSPTNRGREVLRDPNGIENVHTNFWLNVPAKSAPTSGFSSPALSPRRLSTGDFFPSSHIASQGFQVWSSPEFPVSDMLTGFSSQTSPDKTMSSPDRSPLQSPTVKSPRLNPKSPRASPLHHKLSPESSTAWHDSSGHVTVHPLPLPPGAAIHSQPAFVHQITAKPEVSSMTSQWKKGKLIGRGTFGSVYVASNRETGALCAMKEVDLILDDPKSAECIKQLEQEIKVLSQLKHPNIVQYYGSEIVEDHFYIYLEYVHPGSIDKYAREHCGAITESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGVVKLADFGMAKHLSGHAAVLSLKGSPYWMAPEVIQSVMQKDTTSDLALAVDIWSLGCTIIEMLNGKPPWSEFEGAAAMFKVLNQSPPIPETLSSAGKDFLQCCFRRNPAERPSASTLLEHRFLRNSHHLEVSSCAELFSGMKLVDVVHSPREWTKYKVESMPMSSHAQTRKGKLASNGEPGQQPHPETSDSAAASCNSPRSTLEALPGLSPPHSNRSMHNSCPSPNGLDVIHLHSGNSGPRPRTHGKEVPHLF* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00118 741 MobiDBLite consensus disorder prediction 59 93 - -
Eupl13g00118 741 MobiDBLite consensus disorder prediction 39 56 - -
Eupl13g00118 741 MobiDBLite consensus disorder prediction 254 286 - -
Eupl13g00118 741 Gene3D Transferase(Phosphotransferase) domain 1 346 636 - -
Eupl13g00118 741 MobiDBLite consensus disorder prediction 649 692 - -
Eupl13g00118 741 ProSitePatterns Protein kinases ATP-binding region signature. 356 379 IPR017441 GO:0005524
Eupl13g00118 741 MobiDBLite consensus disorder prediction 112 155 - -
Eupl13g00118 741 FunFam Mitogen-activated protein kinase kinase kinase 5 347 648 - -
Eupl13g00118 741 SUPERFAMILY Protein kinase-like (PK-like) 336 656 IPR011009 -
Eupl13g00118 741 SMART serkin_6 350 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00118 741 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 7 639 - -
Eupl13g00118 741 MobiDBLite consensus disorder prediction 254 322 - -
Eupl13g00118 741 ProSiteProfiles Protein kinase domain profile. 350 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00118 741 MobiDBLite consensus disorder prediction 1 22 - -
Eupl13g00118 741 MobiDBLite consensus disorder prediction 39 98 - -
Eupl13g00118 741 Pfam Protein kinase domain 351 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00118 741 MobiDBLite consensus disorder prediction 646 741 - -
Eupl13g00118 741 MobiDBLite consensus disorder prediction 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00118 Eupl-Chr13 1611182 1637910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00118 23 650 MAP Kinase Kinase Kinase AT5G66850 51.524 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl13g00118 Pkinase 1.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00118 - - tss:122661347 949.503