Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00112 ATGGCGGTGACTGACTTTTTCGCCGGAGAAATCGTAACAGAACTTTTAAAACAGCTCATATCGATTAGCAAGAGATGTTGTCGCTGCAAATCGAGTGCCGATCAGCTCATAACAGACATAAACGAATTGCTCCCCATAATACAAGAGATCAAGTACTCCGGCGTCGAATTGCCGCAGATACGCCAGACTCAGCTCGACAGTCTGACTGAGACTCTCCGGAACGGCTTGGAACTCGCCAGAAAAGTCTTGGCTTCGAGCCGATGGAACGTGTACAAGAACCTACAGTTAGCAAGAAAAATGGAGAAGCTCGAGAAGACCGTATCGAGGTTCTTAAACGGTCCGTTGCAGGCCCACATATTAGCCGACGTGCACCATTTGAGGGCTGAGACTGCTGAGAGGTATGATCGACTCGAGGTGCGGCTCGGAGCCTTGAAAATTGGCGCGGGTAATGGGTGGCTGGAAGAGGCGGTGAAGAGGGCTGAAGAGGAGGAGAATAACGGGGCTCATTTGGTAAATTTAGGGGTTGGGATGGTGTTGGCGAAGAAGAAGGTGAAAGAGATGATTGTTGGGAGGGAGGATTTAGGGGTCGTTGGGATTTGTGGGATTGGTGGGAGTGGGAAGACGACTTTGGCAAGAGAGATTTGCAGAGATGAACAAGTTCGAAGCCACTTCAACAACCGGATTTTCTTCACGACGGTCTCGCAGTCTCCGAATGTGGAGCAGTTGAAGCAAAAGCTTCGGGAGCAGATCACAGGAAACCAGGTTTTTGGTTCTAACGATCTGATTCCACAATGGAACTATCAATTCGACTGGAAAAGTAAAGGAAGAACCCTAGTGATTCTGGATGATGTTTGGTCACTTCCTGTGCTCGAACAACTAATTTTTAAAACACCCGGATGCAAAACACTTGTGGTTTCAAGATTCAAATTCCCGACGACGGTGTTGGACGCCACTTACGAACTAGAATTGCTGAGACAAGATGAAGCTATGTCTCTGTTCTGTTACTCTGCTTTCGGACAAAAATCAGTGCCTCTCGCTGCTGATGAGAAACTGGTAGAGCAGGTTGTGAATAAGTGTAAAGGGCTCCCACTGGCTCTAAAAGTTATTGGAGCTTCATTAAGGGACCAAGCTCCATTGTTTTGGACAAGCGCCAAGAATAGGCTTTCGCGAGGAGAACCCATATGCGAGTCCCATGAGAACAAATTGCTTGAACGAATGGCGATTAGTATTGAGTACTTGCCAGAAAAGGTTAGGGAGTGTTTCCTGGATTTGGGTTCTTTCCCGGAGGACAAGAAGATTCCTCTCGACGTGCTCATTAACATGTGGGTCGAGATACACGACATTGATGAAGAAGAAGCTTTTGCAATACTTATCGAGCTTTCAGACAAAAATCTCCTCACTCTGGTGAAAGATGCGCGAGCTGGAGATACAGAAAGTAGTTACTTTGAGATTTCTGTTACCCAACATGATGTGTTGAGAGATCTTGCTCTTCACTTGAGCAATCGTGGAAGCTTAAATGCGCGAAGGCGATTGCTTATGCCAAGGAGAGAAGACAGGCTTCCAAAGGAATGGGAGAGGAATATGGATCAGCCATTCCATGCTCAGATTGTTTCAATTCATACAGGTGGGATGAAAGAATGGGACTGGTTCCATATGGACTTACCAAAGGCTGAAGTTCTCATTCTGAACTTCGCCTCAAGCGACTACTTCTTACCGCCTTTCATTGGTAGAATGCCGAAGCTCAGGGCTCTAATATTAATAAACTACGGTAATTCGAACACAGTTATTAACAATTTATCGGTGTTTGCCTCCATGGGCAACTTGCGAAGCCTCTGGTTGGAAAAGATAACCGTCCCTCAGCTTCCAATAACAACAGTTCCGCTGCATAACTTGCGCAAAATCTCTTTAGTCCTATGCGAGGTTAACAACAGCCTCATTGGGTCGGTGGTAGATCTCCCTTTGATACTTCCTCGTCTCACCGAGCTCACAATGGACCATTGTATCAATCTTACAGAGCTGCCTTCAAGCATCTGCAGGATCCATTCGCTTGAAAGTCTAAGTATCACCAACTGCCATGATCTGCATGATTTGCCGGCCGAGCTGGGGATGCTGAATTCTCTACAAATTCTGAGGCTCTACGCCTGTCCAGCATTGAAGAAGCTTCCTCAGGGGATTTGTGGACTGGAGAAGTTGAAGTATCTTGACATCTCTCAGTGTGTCAACCTGAGGAGCCTCCCTGAAGGGATGGGTCGGATGATCGGATTGGAGAAGATCAACATGAGGGAGTGTTCACAGATCAGGAATCTACCGCGGTCGGTAGCGTTGTTGAGCCATCTGTGCCGTGTCATCTGTGATGAAGAGGCTGCTTGGTTATGGGAAGAAGTGGCGAAGGCGATACCAGGTTGCCGGATTCAGGTAGCAGAGGAATGCTTCAATCTGGACTGGCTTGTAGAGTGA 2457 0.4721 MAVTDFFAGEIVTELLKQLISISKRCCRCKSSADQLITDINELLPIIQEIKYSGVELPQIRQTQLDSLTETLRNGLELARKVLASSRWNVYKNLQLARKMEKLEKTVSRFLNGPLQAHILADVHHLRAETAERYDRLEVRLGALKIGAGNGWLEEAVKRAEEEENNGAHLVNLGVGMVLAKKKVKEMIVGREDLGVVGICGIGGSGKTTLAREICRDEQVRSHFNNRIFFTTVSQSPNVEQLKQKLREQITGNQVFGSNDLIPQWNYQFDWKSKGRTLVILDDVWSLPVLEQLIFKTPGCKTLVVSRFKFPTTVLDATYELELLRQDEAMSLFCYSAFGQKSVPLAADEKLVEQVVNKCKGLPLALKVIGASLRDQAPLFWTSAKNRLSRGEPICESHENKLLERMAISIEYLPEKVRECFLDLGSFPEDKKIPLDVLINMWVEIHDIDEEEAFAILIELSDKNLLTLVKDARAGDTESSYFEISVTQHDVLRDLALHLSNRGSLNARRRLLMPRREDRLPKEWERNMDQPFHAQIVSIHTGGMKEWDWFHMDLPKAEVLILNFASSDYFLPPFIGRMPKLRALILINYGNSNTVINNLSVFASMGNLRSLWLEKITVPQLPITTVPLHNLRKISLVLCEVNNSLIGSVVDLPLILPRLTELTMDHCINLTELPSSICRIHSLESLSITNCHDLHDLPAELGMLNSLQILRLYACPALKKLPQGICGLEKLKYLDISQCVNLRSLPEGMGRMIGLEKINMRECSQIRNLPRSVALLSHLCRVICDEEAAWLWEEVAKAIPGCRIQVAEECFNLDWLVE* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00112 818 Gene3D - 324 408 IPR042197 -
Eupl13g00112 818 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Eupl13g00112 818 SMART AAA_5 193 343 IPR003593 GO:0016887
Eupl13g00112 818 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
Eupl13g00112 818 PRINTS Disease resistance protein signature 196 211 - -
Eupl13g00112 818 PRINTS Disease resistance protein signature 271 285 - -
Eupl13g00112 818 PRINTS Disease resistance protein signature 359 373 - -
Eupl13g00112 818 PRINTS Disease resistance protein signature 726 742 - -
Eupl13g00112 818 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 816 IPR039203 GO:0050832
Eupl13g00112 818 SUPERFAMILY RNI-like 553 781 - -
Eupl13g00112 818 Gene3D - 409 495 IPR036388 -
Eupl13g00112 818 Pfam NB-ARC domain 181 409 IPR002182 GO:0043531
Eupl13g00112 818 Gene3D Ribonuclease Inhibitor 514 792 IPR032675 -
Eupl13g00112 818 Gene3D - 162 314 IPR027417 -
Eupl13g00112 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 424 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00112 Eupl-Chr13 1495086 1498533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00112 193 775 WRKY Transcription Factor Family AT5G45050 22.135 3.39e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00112 - - ming:122072962 1190.25