Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00070 ATGGTTGCCGCATCCTCGCCTTCATTTCTTCGCTCCTCGCCTCACTTCCTCTCCCCAAAGATCGCCATTAACACACCTTCTCCGGCGCCGGCGTGTGTTAGATTCCGTCAACCTCGTTTCTACGCTGCCTACACCGCGGCGGAGACTGTAAGACCACCGTATCCCTGTTCTAAGATGGCTTCTTCGTCATCGTCGCTATACGAAGTCCTCGGGATTCCGATGGGTGCCACGTGTCAAGAGATTAAGACAGCGTATCGGAAATTGGTGAGAGTTTGTCATCCCGATGTGGTGGCGATCAATCGGAAGGACACATCGGCTTCTGAGTTTATGAAGATCCACGCCGCTTATTCGACGCTGTCGGATCCCGAAAAGCGCGCCGATTACGATCGGAACCTATTTAGGAGGCAACGACCGTTTAGTTCTCAGTCTGGCACGTCGGCGGCAACATCGTCGATGTCAGGATTTCCCGGCTATACTCGCCGGACTTGGGAGACCGATCAGTGTTGGTAG 510 0.5412 MVAASSPSFLRSSPHFLSPKIAINTPSPAPACVRFRQPRFYAAYTAAETVRPPYPCSKMASSSSSLYEVLGIPMGATCQEIKTAYRKLVRVCHPDVVAINRKDTSASEFMKIHAAYSTLSDPEKRADYDRNLFRRQRPFSSQSGTSAATSSMSGFPGYTRRTWETDQCW* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00070 169 Gene3D DnaJ domain 55 151 IPR036869 -
Eupl13g00070 169 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 25 169 - -
Eupl13g00070 169 SUPERFAMILY Chaperone J-domain 62 144 IPR036869 -
Eupl13g00070 169 Pfam DnaJ domain 66 129 IPR001623 -
Eupl13g00070 169 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Eupl13g00070 169 CDD DnaJ 67 121 IPR001623 -
Eupl13g00070 169 ProSiteProfiles dnaJ domain profile. 65 132 IPR001623 -
Eupl13g00070 169 PRINTS DnaJ domain signature 85 100 IPR001623 -
Eupl13g00070 169 PRINTS DnaJ domain signature 67 85 IPR001623 -
Eupl13g00070 169 PRINTS DnaJ domain signature 104 124 IPR001623 -
Eupl13g00070 169 SMART dnaj_3 64 124 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00070 Eupl-Chr13 1002262 1003518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00070 59 129 C2H2 Transcription Factor Family AT1G74250 40.506 4.70e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00070 - - nnu:104607589 223.402