Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00053 ATGACACTAGAAGACTTTTTCACGTTGACTGAGATGAAGGATGGGCTCACTGCCCTTGCTAGAGTTGAAGAATTGGTCTCTTTGATGCAGAAGGAGAAAGATTCTGTTGTGAAGAACGTCAGTGAGGCAGCCAGACAATGGTCTACTGTTGCAAGTACATTGGCAGCTACAGAGAATAAGGATAATCTTGATCATTTTATTCGGTTGGACGGACTCTATTTCCTTGATCAATGGCTTCTGGAAGCTCAAAAGTGTAGTAATGACACAAATGACAGCTCTGTGGAAGAATCGATCAGTGCGCTGTTAGTAGCACTTAAGAAGCTGCCCATAGACAATGAGAGGTCAGTTTATTCTGGAATCAGGGTAACTGTAAAGAATCTTTTTGGACACAAGAGCTTTAATGTTCAGGAAAGGGCAAGAGCTCTATTTGATAGGTGGAACCAGGGAAGGGACAATGATGCAGATCGCCAGGATGTTTTGAAAGATGGTGGATGCCATGATGATGAGGTTAAGCCAGCCGGTGCAACGGTGGCAGTAGAGAGTGGGTGCCTGCAACATTCGGCTGTTGATATTTGTCCCGTTGAAGGAACTCGAGGAAGTGCTGATGAAGATAATCATGTAGTAAAGCTAGCTGGGGATGAATTGCAGAATTCAAGAAGCTCAGATGGTTCTCAGTCGGAAAGCATTAAAGATGTAAAGATCCCTATTTCTAATAATCAGGACGCCTCTCATACAAGTTTGAGCCGGGTAGATGAAGTGGATAGATTTCGAGGAGATGCTCAGGGCTCATCTATCGTGTCAACCTCTTGTCAAGAGAGCCTTTCTATTATAGTTGAATCCTCTATACGTCCTGCAGAAAGAACGAAAACTGTTGGGACTTGCAGTTCTCCAGTTCCAATGGGAAGTAAAGTTGAGGTCAGGTCCTCAGATGCTTCAGAGTTGAATGATTTCACTGATGGTGCAAGAGAGACAGATATGATTAAAGGTAGCCCCTATAAATTTGCTAAAATGGAAATGTTCTCTGTTTCTACCTCATCTGGATCTGAACGTGTTTCTTCTTCCAATGATCCTGCAGATGCTCAGCAGTCTGTGATGCAGCCTCCTGTACTTAGTGATGCTGATGCCAAAGATGGTGAATTCTGTCTAAAAAAGACTTCCCCCACTGGTCTTGACGGTGATACGAGTACACCGGTCTCTGAACCAAAGAGTGAGATGGTTGATTGTGGGGTGACAAAACATTTGAGAAATACAGTGGAGCTTAAGGCTACAGATCAACATGGTGGATGTTTTTCTAATGTTTCGCAGGACTTATCTATTAATGTATGCATCTTGAGAAAACCAGAGGATCTGGAGACTCCTTTTTCCAGGAAGGAGGATATGGGAGCAGTTGATGATGTGAAAGATCTTGCTGGTGAGCCAATTTTGAATGTTGGAGAGGATTCTGCAACTGCTGGTGACATCTCAAAACCGACAATGGATACTGAAGTCTCAGATAAGATTGACAGGAGAAGACCAGATATGGAACTTGAGTATGTGGTAGATGATGCACTAGAAGTAGCTCGCCAAGTCGCTAAAGAAGTGGAGCGAGAGGTAGTGGATTACAGAGAACCGTTTTGCAGCTCTTCTGATGAGAAAAATTCGGAGGGTGGAGTTGTACAGCCTAGTAGCCCTGATTCTATAAATGGCGAGCAAGACCAATGCGTGGCGGGACCACTAAATGAAATGCCAACCAGACAAAATCTTTCTGGTGAGGCACTTTCTCCAAGGGGAGAAAATCATTTAAAAAATTCGAAGACCATGGACAAACCAGAAGATTGCATGCACAATCCGGACTCATCCCAGGTCAGCGACGCTGCTCAAGAGCCAGCCGATAACATTGAGAAGAGCATGTGTAATTTTGATCTGAATGAAGAGGTTCATGCAGAGGAGATGGATCACCCAACAACTCCAATCTCTGCGCACATCACTGTCGTTTCTGCTTCAAGAGCAGCAGCTCCTGAATTGCCTGCAGCTCCTCCTCTCCATTTTGAGGGGGAACTAGGATGGAAGGGGTCTGCAGCAACTAGTGCCTTCCGTCCCGCATCTCCTCGCAGGACTCCAGATGGTGAGAAGACACACTCAATTGAGGGGAGCAGCTACGGTTCAAAGCAGAGGCAGGACTCCCTTGATATTGATCTGAATATGGCTGGGGGGGATGATGATGGAGCTGCTGATCAAGTATTGACGAAACAGATCCCAGTCTCCTCAGGCCTCCCGTCAGGGGAATCTTCCATCGAAGTGAGTTCGAGAAGAGCAGAGAGGCTCAAGTTGGACCTAAATCGTGTTGGTGACAATGAGGATGCTCCATCCTCAGATTGGAGGACGGAGGGACGATTCCTTTACCCCCACCGAAATGGCCATCGCAGCCCGTCCCCTGCCTCATCGTCGTCATCAAGGCAACCTTCCATGAGGAACATCGACTTGAATGACAAACCGTCTTTCTTCAACGATTCTTCTGATCAACAGTCCGATCTTGGTAAATCCTCCCCCCAAGACATGAATGCTTCTGGAGCGTTTAAACTGGATGATCCTGTTATTTCAATAATGGGTACAAAAGTGGAGGTAAGTAGAAAAGAGTGTGTCCCCCAAACTTGGTCCTTCCTCCCAAATGGGCAAGTTGCTGAATCTCCAATGGGTGCTAACTTAGCAAGATCAGGTCGTGGTGGTGGTGTGGGGGTTCGGCCTGCAATGGCTTATACACCTCCACCTCCATTGTTTGGGTACAATGGCCTCACGATGGGGCCCCTCCATGTCTCTCTCTCCAGCTATGTATGGAACTGCCTCGATCCCGTACATGGTGGATTCACGAGGAGCCCATGTGGTACCACAGATAATGGGTTCCTCTATGGCTGTTCCACCATCCTACACTCGACCACCGTTCATTATGAGCATGACCAGCACACTGTCAGGTTTGAATGGGGTTGGACCGAAACGCCCAACCCTTGA 2985 0.4667 MTLEDFFTLTEMKDGLTALARVEELVSLMQKEKDSVVKNVSEAARQWSTVASTLAATENKDNLDHFIRLDGLYFLDQWLLEAQKCSNDTNDSSVEESISALLVALKKLPIDNERSVYSGIRVTVKNLFGHKSFNVQERARALFDRWNQGRDNDADRQDVLKDGGCHDDEVKPAGATVAVESGCLQHSAVDICPVEGTRGSADEDNHVVKLAGDELQNSRSSDGSQSESIKDVKIPISNNQDASHTSLSRVDEVDRFRGDAQGSSIVSTSCQESLSIIVESSIRPAERTKTVGTCSSPVPMGSKVEVRSSDASELNDFTDGARETDMIKGSPYKFAKMEMFSVSTSSGSERVSSSNDPADAQQSVMQPPVLSDADAKDGEFCLKKTSPTGLDGDTSTPVSEPKSEMVDCGVTKHLRNTVELKATDQHGGCFSNVSQDLSINVCILRKPEDLETPFSRKEDMGAVDDVKDLAGEPILNVGEDSATAGDISKPTMDTEVSDKIDRRRPDMELEYVVDDALEVARQVAKEVEREVVDYREPFCSSSDEKNSEGGVVQPSSPDSINGEQDQCVAGPLNEMPTRQNLSGEALSPRGENHLKNSKTMDKPEDCMHNPDSSQVSDAAQEPADNIEKSMCNFDLNEEVHAEEMDHPTTPISAHITVVSASRAAAPELPAAPPLHFEGELGWKGSAATSAFRPASPRRTPDGEKTHSIEGSSYGSKQRQDSLDIDLNMAGGDDDGAADQVLTKQIPVSSGLPSGESSIEVSSRRAERLKLDLNRVGDNEDAPSSDWRTEGRFLYPHRNGHRSPSPASSSSSRQPSMRNIDLNDKPSFFNDSSDQQSDLGKSSPQDMNASGAFKLDDPVISIMGTKVEVSRKECVPQTWSFLPNGQVAESPMGANLARSGRGGGVGVRPAMAYTPPPPLFGYNGLTMGPLHVSLSSYVWNCLDPVHGGFTRSPCGTTDNGFLYGCSTILHSTTVHYEHDQHTVRFEWGWTETPNP* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00053 994 MobiDBLite consensus disorder prediction 380 404 - -
Eupl13g00053 994 MobiDBLite consensus disorder prediction 774 796 - -
Eupl13g00053 994 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 16 150 IPR035441 -
Eupl13g00053 994 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 1 938 - -
Eupl13g00053 994 Pfam TFIIS helical bundle-like domain 101 147 IPR017923 -
Eupl13g00053 994 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 63 157 IPR035441 -
Eupl13g00053 994 MobiDBLite consensus disorder prediction 538 625 - -
Eupl13g00053 994 MobiDBLite consensus disorder prediction 801 848 - -
Eupl13g00053 994 MobiDBLite consensus disorder prediction 774 851 - -
Eupl13g00053 994 MobiDBLite consensus disorder prediction 345 366 - -
Eupl13g00053 994 MobiDBLite consensus disorder prediction 594 608 - -
Eupl13g00053 994 MobiDBLite consensus disorder prediction 543 563 - -
Eupl13g00053 994 MobiDBLite consensus disorder prediction 688 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00053 Eupl-Chr13 799977 814479 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Eupl13g00053 Med26 5.6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00053 - - nnu:104604237 929.472