LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl13g00041	ATGTCGACTCACCAAGACGATCTGGACCTCCTCCTCTCCCTTCAAGACAGGGTTTTAGAAACCCCACCAGCTTCTCCTTCTACAGACTATCTTCCATTCGATGGATTGCCGAATCGGTCCGGGAACGCAGACATGTCTGTCTTCAGAGATGCCGTTCGAGATTACATCGAAGACAAGCCCAATATCGTCGAGAAAGCTCCCAAATTGAACTTGCCGAAGAACTCGAACGATGTAGATGTCGAGAAATTTTCGGGTTTGCGTATTCGAAATTTACTAGTCTCCGCTGCAGAGCTGAGTAACCATTTTTCTGACTCCCGCTTCATTCGTTTGCCGGCCATAAGGAATTCACTTCTTGGAGATAATATTTCGGGTTGTTGGGCGACTGTTGGTGTTTTGACCGAGAAGGGTAGTCCGAAAGTGAGCTCAACAGGGAAGAACTACGGTATATGGAAAATTGGGTGTTTGGATGAAAAGATCGTTTCTGTTTTCCTGTTCGGGGATGCGTATGCGAAGAACTGGAAGGAGCAGGCTGGAACAGTCTTTGCTCTGTTCAATTCTGGTGTTCGCAAGGATGCTGAGGGCAAAGGGTTTTCTCTGAGTGTATTTTCTGCTGGTCAAATTTTAAAGATGGGTACTTCTGTGGATTATGGCGTTTGCAAGGGAAAGAGAAAGGATGGGATGGCTTGTACAGTGGTCATAAATAAACGTCGCGGGACATATTGCAAATACCATAAATCAAAAGCATCCGAGAAATATTCTGTTACGCGTTCTGAACTCAAGGGAGGGAACTTAAGAACAGCCTTTAGGGATCCTCTCCAGTCAGAAGGAATTTATATGGTGGACCCCCTAGCTAACAGAACAAGCTTGACAAAATCCAAGCAATCAGTGAAAGTGTTGTCTGTGGATGCACTGAAAAGGGCCTTGAGTAATGCAGGTAAAGTGACAACTAATGCCAACTCACAAGGAATAAGATTTCTTACAAACATGACAGGGAAAATGCATCCAAAACATCCAAGTAAAGGACCTGAGGTGCCAAACATACAAAAAAATAGTTCAGAGAAGAGGTTATCATCAGCCATGAAGTTGGCTTCAACCATAGTCATAAAAAAACAACCAGAGGCAAAAAGAATAAAAACTGAGCAGACTTCGGAAAAGATGATCGAATTAGAACTTGTTAGTTCAGAGGGAGAAGGGTGA	1197	0.4386	MSTHQDDLDLLLSLQDRVLETPPASPSTDYLPFDGLPNRSGNADMSVFRDAVRDYIEDKPNIVEKAPKLNLPKNSNDVDVEKFSGLRIRNLLVSAAELSNHFSDSRFIRLPAIRNSLLGDNISGCWATVGVLTEKGSPKVSSTGKNYGIWKIGCLDEKIVSVFLFGDAYAKNWKEQAGTVFALFNSGVRKDAEGKGFSLSVFSAGQILKMGTSVDYGVCKGKRKDGMACTVVINKRRGTYCKYHKSKASEKYSVTRSELKGGNLRTAFRDPLQSEGIYMVDPLANRTSLTKSKQSVKVLSVDALKRALSNAGKVTTNANSQGIRFLTNMTGKMHPKHPSKGPEVPNIQKNSSEKRLSSAMKLASTIVIKKQPEAKRIKTEQTSEKMIELELVSSEGEG*	399

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl13g00041	398	MobiDBLite	consensus disorder prediction	333	352	-	-
	Eupl13g00041	398	FunFam	DNA replication licensing factor mcm10	72	246	-	-
	Eupl13g00041	398	PANTHER	PROTEIN MCM10 HOMOLOG	37	334	IPR040184	GO:0003690\|GO:0003697\|GO:0006270
	Eupl13g00041	398	Gene3D	-	72	245	IPR012340	-
	Eupl13g00041	398	Pfam	Primase zinc finger	211	256	IPR015408	GO:0005634\|GO:0006260

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl13g00041	17	397	Core DNA Replication Machinery Family	AT2G20980	54.872	3.50e-136	393

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl13g00041	K10736		-	nnu:104603622	551.206