Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00037 ATGACAGTTGAAGAAGGTAAACCAGAGAAGAAGAGTGTGTTGGTCGGGATACGTATCGATAGAGATGGTCGAGAGTTGCTCAATTGGGCCCTTGTTAAAGTTGCCGAACCAGGAGACCGCGTAGTTGCAGTTCATGTTTGTCGCGATTCTGGAAAAGATCCTGGCTCCAAAGAGAGCTCCTCATTTGATGGTTATTTGGAAGTTTATGAAGGTTTGTGTAGCATAAAACAGATTGATCTCACAGGTCGGGTCTGTCATGGAAGTTCTGTTCGAAAGGTTTTAGTAAGAGAGGCAAAGCTTTGCACAGCCATGGCTGTAGTTGTGGGAATAAGCAGGCGAAATGCTCTCTGGGGTTGGGTTTCTATGGCCAAGTATTGTGCCAAGTGTTTACCGTCAACTACCAAAGTACTGGCTGTCCACAATGGGAAGATTGTCTTCGAGAGCGATTCCACTAACCAGCCAATAGGACTTAAAGGAGATCCAAGGCCAAGTCTTTACCCGATTCGACCTCCTGGTCTCAAAGAAAACCAGCTCGGTTTCGTAGCTCCAGAGACGCCTGAGATTGAAAATCCCATTCCTCAAGTGGTTCAGAACTCAAAAGACGGATCGAGTGATGGTGGCAATGACAGGAAACAGGACAATTTCAGCATTGTTCATGAATACAAGGAGGAAGTTTCTTCAAACTCAATTTCTGTTCTTATGAAACATCTACCAGAACCAAGGCCTGGTTGGCCCCTTTGTCGTAGAGCAGCTTCAGTGATTCCGGAAACTTTGAAAGATTCAGAAGCTAGAAAAATGTCTGTAGTTCAATGGGTAATGAGTCTACCTAATAGGACTCCTATGACTCAAACCCAGATTGGTTTTGGTTTGGATAAAACAGAAATTCCTTTTGAAAGAGAGACTGTTGATCATGGGAATAAGAACAATAAGAAATGTTTGTCTGCATGCGGGGAGCTACCCAAGGAGTTGGAGCTTCTCCAAAGAACAAATTCCTCTGGATGTAGGTGGTTCAGCCTCAAGGAGCTCAAGAGTTCGAACGCTCAATTCTCCTCAGAAAATTTGATTGGGAAAGGGAGGTGGAGCCATGTATACAAAGGTCGTCTTCCCAATGGCAAGCAGGTAGCAGTAAAGATTTTGAAATCACTGAAAGAAGCATGGAAGGATTTCATCTTGGAAGTCGATATCATCTCTTCCTTGAAGCACAAACACATTACACCTATGATTGGAGTATGCATCGAAAACAATCATCTTATCGCAGTTTACGATTTCTTTTCCAGAGGAAGTCTGGAGGAAAACCTCCATGTTAGGAAAGAAAAACCTGTGTTGTCATGGGAGGTGAGATTTAAGGTGGCTGTTGGAGTTGCTGAGGCCATAAATTACCTACACAAAGAATGCTCGCGGCCTGTTATTCATAGAGATGTCAAGTCTTCAAATATTCTTCTCTCGGATGACTTCGAACCACAGTTATCTGATTTTGGTCTGGCTATATGGGCACCAAGAAGTTCATCTTATGAGACACACAGTGATGTAGTAGGGACTTTTGGGTATCTAGCTCCTGAGTACTTCATGTATGGGAAGGTTAGCGACAAGATAGACGTCTATTCCTTTGGTGTGGTTCTCCTTGAACTGTTATCGGGAAGAAAGCCAATAGGTACCGAGAATCCCAAGGGTCAGGAAAGCTTGATCATGTGGGCAAAGCCAATATTGGAGAATGGGGATATAATGGGTATATTAGATCCAAATTTAGCTGAAAAATTCGATGAGGTTCAAATGCGAAGAATGGTTCTAGCTGCAACCCTTTGCATCACAAGGACAGCTCGACTCCGGCCACAAATGGGCGAGATAGTGATGCTTCTACGAGGGGAGAAAAATGTCGAGGAGTGGGTGAACACCCATGTCGGTGATCCAAAGGAGTCCGATAACCAGGACGATGACGAACCTTATCCGGATTCTAGTGTCGACTCACATCTAGATCTTGCATTGCTTGAGATGGATGGTGATACTACATCATTCAGTAGTGTGGAGCAAAACAATCATCATTCCTTGGAGAACTACTTGAAAGGACGTTGTAGTCGATCATCAAGCTTCCATCAGCTTAGTACTTTTTCCTCCTTTTCACTTGTTGAAGACAATTTTGCCGGCCAACTTGGCACACGGAATATGTAG 2166 0.4391 MTVEEGKPEKKSVLVGIRIDRDGRELLNWALVKVAEPGDRVVAVHVCRDSGKDPGSKESSSFDGYLEVYEGLCSIKQIDLTGRVCHGSSVRKVLVREAKLCTAMAVVVGISRRNALWGWVSMAKYCAKCLPSTTKVLAVHNGKIVFESDSTNQPIGLKGDPRPSLYPIRPPGLKENQLGFVAPETPEIENPIPQVVQNSKDGSSDGGNDRKQDNFSIVHEYKEEVSSNSISVLMKHLPEPRPGWPLCRRAASVIPETLKDSEARKMSVVQWVMSLPNRTPMTQTQIGFGLDKTEIPFERETVDHGNKNNKKCLSACGELPKELELLQRTNSSGCRWFSLKELKSSNAQFSSENLIGKGRWSHVYKGRLPNGKQVAVKILKSLKEAWKDFILEVDIISSLKHKHITPMIGVCIENNHLIAVYDFFSRGSLEENLHVRKEKPVLSWEVRFKVAVGVAEAINYLHKECSRPVIHRDVKSSNILLSDDFEPQLSDFGLAIWAPRSSSYETHSDVVGTFGYLAPEYFMYGKVSDKIDVYSFGVVLLELLSGRKPIGTENPKGQESLIMWAKPILENGDIMGILDPNLAEKFDEVQMRRMVLAATLCITRTARLRPQMGEIVMLLRGEKNVEEWVNTHVGDPKESDNQDDDEPYPDSSVDSHLDLALLEMDGDTTSFSSVEQNNHHSLENYLKGRCSRSSSFHQLSTFSSFSLVEDNFAGQLGTRNM* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00037 721 SUPERFAMILY Protein kinase-like (PK-like) 330 619 IPR011009 -
Eupl13g00037 721 CDD USP_Like 13 139 - -
Eupl13g00037 721 Gene3D Phosphorylase Kinase; domain 1 317 423 - -
Eupl13g00037 721 SMART serkin_6 349 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00037 721 PANTHER OS08G0249100 PROTEIN 228 638 IPR046958 -
Eupl13g00037 721 MobiDBLite consensus disorder prediction 189 212 - -
Eupl13g00037 721 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Eupl13g00037 721 Pfam Protein kinase domain 350 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00037 721 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 318 423 - -
Eupl13g00037 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Eupl13g00037 721 MobiDBLite consensus disorder prediction 632 652 - -
Eupl13g00037 721 FunFam Putative receptor-like serine/threonine-protein kinase 424 635 - -
Eupl13g00037 721 Gene3D Transferase(Phosphotransferase) domain 1 424 640 - -
Eupl13g00037 721 Gene3D HUPs 10 141 IPR014729 -
Eupl13g00037 721 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 139 - -
Eupl13g00037 721 ProSiteProfiles Protein kinase domain profile. 349 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00037 Eupl-Chr13 590731 593795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00037 336 619 Trihelix Transcription Factor Family AT5G38560 45.704 7.22e-78 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Eupl13g00037 Pkinase 7.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00037 - - nnu:104604253 842.032