Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00027 ATGTTGACTTCCAAGATGAAAACCAAGCTTTCCCTCTCTTATCACCTCCTCCTCTTCTTCTTTCTTTTTCTCTTTCTAATAGAAACTAGAGCAGACAGAGAGGATAAGAAAAGCGTTTATGTCGTGTATATGGGAGCTGTGACTTCATCACCGGGTTCGTCGAGGGAGGAACACATTCAGCTCCTCACTTCAGTGTCTCACACCAGAACTTCACACGACTCGATCGTGGGACTTCTTACAGTATCTAACAGATCTGAAGACAGACGCAAAGCTGAGTTCAATTTCCAACCCATCGTCACTGGGAACGGACACCATCATTGGAATCTTCGACACAGAAAGCTGATCGGCGCAAGATACTACAACGAGAAGACACCTAGAGACGCGGTAGGCCATGGAACCCACACAGCCTCCACAGCGGCTGGGAGCTCTGTGCCCGGTGCATCTTACCATGGCCTAGCCGAGGGAACCGCAAAAGGTGGGTCCCTTTCTTCAAGGATAGCTGCCTACAGGGTATGCACATTGGGCGGATGCCTTGGGTCCTCGATCCTGGCCGCGTTTGATGATGCGATTAAAGATGGGGTCGACGTGATTTCATTGTCGCTCGGTGCGCGGTCCACGTTCACGAGGCCCAACTTCTCGACTGACCCGATTGCCATCGGAGCTTTCCATGCAGTCGAGAAGGGTATCACTGTGGTATGCTCAGCAGGAAATTCTGGCCCCGACTCAAAAACAGTTGTGAACGCAGCTCCGTGGATCTTGACCGTTGCTGCCACCACCATTGACAGGGATTTTCAATCAGATGTTGTGTTGGGCGGAAACAAGGTGGTCAAGGGTGAAGCCATAAATTTCTCTAATCTGCAGAAGTCCCCCATTTATCCCTTAATATATGCCGAATCAGCAAAATCGAGTTCAAATGCCAATGATGCGAGAAACTGCAACCCAGCTTCACTGGATGGAAATAAGCTCAAGGGGAAGATTGTACTCTGCGAGAATTCGGATCGCACTTATTCAAAAAGAGTGAAGATGTGGGAAGTGAATAACTTGGGAGGGATCGGATTGGTTTTGATCGATGACTTACAAAGAGCGGTTGCGTCCCTTTATGGAGCTTTCCCAATGACTGTAGTCTCTTCCCGGGAAGCTGCCGATATCCTCTCCTACATCAACTCAACCAGAAACGCAGTAGCAACAATTCTACCTACCGTTTCGGTTGCGAATTATAAGCCGGCGCCTACAGTCCCTTACTTCTCATCTAGAGGCCCTTCTCCCGACATCGCCGCACCTGGGGTGAATATTCTTGCAGCAGTGATTGGAACTAACGATACATTTGAAGCTCCAGAAGTCCAGAGGGTATCCCAATTTAGATTGCTCTCAGGAACTTCCATGTCATGCCCACATGTTTCCGGCATTGCCGCAACAATCAAATCTAGATATCCCAGCTGGAGTCCTGCTGCAATAAGATCAGCCATTATGACTACAGCGATTCAAGTAAACAATGAAATGGCTACACTCACAACATATTTGGGCTCAACGGCCACACCATATGATTATGGTGCAGGGGAAGTAAGCCCATCAAGAGCATTGCAACCAGGGCTAGTTTACGAAGCCGATACAACTGACTACTTGTACTTTCTCTGTAACTATGGATACCAAGTTTCCACAATCAAACTCATCTCAAATGTGCCGGATGGATTTGACTGTCCCAAGAATTCTAGAACAGACTTGATCTCCCAACTCAACTACCCATCAATTTCCATTTCCAAATTCAATGGGCAACAGAGCAAGAAAGTGAGTAGAATGATCACGAATGTTGGCACTGACTATGAAACTATATATCGTGTTAGCGTGAAATCACCACAAGGTTTGTACGTGAAGGTGGTACCCAATAGGCTTCAGTTCACGAAGATCAGAAACAAGCTGAGCTACCAAGTGGTCTTCTCATCAACCTCATTTTCTTCAGTGAATGGAGATCTCTTTGGGTCAATTACTTGGACTAATGGGAAGTACAAGGTTCAAACTCCGTTTGTGGTTAGCAGTGCCTGA 2040 0.4721 MLTSKMKTKLSLSYHLLLFFFLFLFLIETRADREDKKSVYVVYMGAVTSSPGSSREEHIQLLTSVSHTRTSHDSIVGLLTVSNRSEDRRKAEFNFQPIVTGNGHHHWNLRHRKLIGARYYNEKTPRDAVGHGTHTASTAAGSSVPGASYHGLAEGTAKGGSLSSRIAAYRVCTLGGCLGSSILAAFDDAIKDGVDVISLSLGARSTFTRPNFSTDPIAIGAFHAVEKGITVVCSAGNSGPDSKTVVNAAPWILTVAATTIDRDFQSDVVLGGNKVVKGEAINFSNLQKSPIYPLIYAESAKSSSNANDARNCNPASLDGNKLKGKIVLCENSDRTYSKRVKMWEVNNLGGIGLVLIDDLQRAVASLYGAFPMTVVSSREAADILSYINSTRNAVATILPTVSVANYKPAPTVPYFSSRGPSPDIAAPGVNILAAVIGTNDTFEAPEVQRVSQFRLLSGTSMSCPHVSGIAATIKSRYPSWSPAAIRSAIMTTAIQVNNEMATLTTYLGSTATPYDYGAGEVSPSRALQPGLVYEADTTDYLYFLCNYGYQVSTIKLISNVPDGFDCPKNSRTDLISQLNYPSISISKFNGQQSKKVSRMITNVGTDYETIYRVSVKSPQGLYVKVVPNRLQFTKIRNKLSYQVVFSSTSFSSVNGDLFGSITWTNGKYKVQTPFVVSSA* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00027 679 Pfam PA domain 293 377 IPR003137 -
Eupl13g00027 679 Pfam Fibronectin type-III domain 577 676 IPR041469 -
Eupl13g00027 679 Gene3D - 261 404 - -
Eupl13g00027 679 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 109 676 IPR045051 -
Eupl13g00027 679 ProSiteProfiles Serine proteases, subtilase domain profile. 1 527 - -
Eupl13g00027 679 Gene3D - 544 679 - -
Eupl13g00027 679 SUPERFAMILY Subtilisin-like 116 531 IPR036852 GO:0004252|GO:0006508
Eupl13g00027 679 CDD PA_subtilisin_like 267 397 - -
Eupl13g00027 679 PRINTS Subtilisin serine protease family (S8) signature 457 473 IPR015500 -
Eupl13g00027 679 PRINTS Subtilisin serine protease family (S8) signature 127 140 IPR015500 -
Eupl13g00027 679 FunFam subtilisin-like protease SBT1.5 261 404 - -
Eupl13g00027 679 Pfam Subtilase family 121 519 IPR000209 GO:0006508|GO:0008236
Eupl13g00027 679 ProSitePatterns Serine proteases, subtilase family, serine active site. 458 468 IPR023828 -
Eupl13g00027 679 Gene3D Peptidase S8/S53 domain 110 540 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00027 Eupl-Chr13 499662 504572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00027 111 678 Subtilisin-like Serine Gene Family AT1G20150 54.790 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00027 K25898 - psom:113359904 800.816