Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00010 ATGGCTTTCCTTGTAGTGTTTTCCCTCTCAGTTTTAGCTCTTCTTCTATCCTCTCAAACCACCCCATTTCTTCTTGTCGACTCTGCCGCTTTAAACACTCTTACCGACAAGGAGGCCTTGCTCTCATTTAAGACTAGTCTAATTGCCGACCCTTCCAACTCCCTATCCACATGGAACCAAAACTTTACTCTCTGCAATTGGACCGGAGTCGTCTGCAACGAAAACAGCAGCCAAAGAGTCGTCGGTCTAGATCTTCGAGGCCTCGGATTATCAGGCACCGTAAGCCCGCATCTTGCCAATCTCTCTTTCCTTCGTTCTCTTCAACTACAAAACAACCAATTTTCTGGAACTCTTCCTGATCGAATAGGTGATCTTTCTCGCTTGCGTGTTCTAAATATCAGTTCAAACCGCATCCAAGGTGAAATCCCACGTAACATCAGCAGGTGCTCGGAGCTCGTTGTCCTAGATTTGATGGCAAATGAGATATTGGGTGTTATTCCTACGGACCTCGATCGTCTTTCAAAGCTCCAAGTCCTAAAGTTGAGCCGAAACAAGCTTTCAGGTGCAATCCCTCCATCCATTGGAAACCTCTCATCACTCACTACACTAGACTTAGCCACCAATTCTCTAGGTGGAACCATACCCAGTGACTTGGGCCGTCTTCGAAACTTAAAAACACTCGAACTCTCCATTAACAATCTCACAGGCATCGTTCCTCCGTCCATATACAACATTTCTTCCCTTGTCTTCATTGCTTTGGCTTCAAACCGTCTGTGGGGTGAAATTCCAAGTGATGTCGGTGATACGCTCCCTAATCTTTTAGACTTCAATTTTTGCATCAACCAATTCACTGGTGGGTTTCCAGGATCGCTACACAACCTCACCAAGATCCAAGGAATTCGGATGGCACGTAATTTTCTTGTTGGATCGCTTCCACCAGGACTAGGGAATCTCCCTGACCTCCGACTCTATAATATTGGTTTCAATCGGTTTGTAAGCTCTGGCGATGCTGGACTGAGTTTCATCACTTCTTTGACAAACAGCACCAATCTTGACTTCCTCGCATTTGATGACAATCTTTTAGAGGGTGTGATTCCTGAATCCATCGGCAATCTTTCGACCGTTCTCACCAAATTATATATGGGTGGTAATCGGATCTACGGCAACATACCTGCCTCAATCGGTCGGCTTAGAAGTTTGGCGTTGCTAAACTTAAGCCATAATTCAGTTTCCGGTGAAATTCCATTGGAAATTAGCCAGCTCAAGGAACTGCAGATATTGGGTTTGGCCGGAAACAAATTAGCTGGTGAAATTCCAGCCTCCCTAGGAAATCTGGGCAAACTTACTGAGCTTGAATTGTTTGGGAATGAACTGGTGGGAAGAATACCAACCACTTTTGGTAACTTCCAACGCTTACTTTCGTTGGATCTATCCAATAATAGGCTCAATGGAAGCATACCTAAAGAAATTTTCAGCCTCTCCAGTTTGAGCATTCTTCTCAACTTATCCAAAAACTCTCTAAATGGACCTTTGCCTCAAGAAGTTGGGAACTTGGAAAATGTAGTCACAGTTGATCTCTCGTATAATGACTTGTTCGGAAGTATTCCGGCCTCAATCGATAATTGTAAGAGCTTGGAGGAACTGTTCATGACCAATAATTTCTTCTCGGGCCATATTCCTGATTCTCTAGGAAATGTGAAAGGACTGGAGACTCTAGACCTTTCCTCAAACCAGCTCTCAGGTCCTATTCCTTATGATCTTCAGAAACTTCAGGCCCTCCAGTTATTGAACCTCTCTTACAATAACCTCGAAGGAGGAGTTCCAAATGACGGTTTGTTTAGAAATCTCTCCAGAGTCGATCTCGAAGGAAACTCGAAGCTTTGCTTATTTCCTTCAGCCTGTAAGAGCAATCGAGGTAATGGAATTGCAGCTCGAATTATAATCGCAATATCAGGTTCAATCGCATTATGTATTTTGGTGGCTTTGTTAGTATGTATTTCCTTGTACAGAAGAAAAAACGTGGCAAAGATTGGAGTACTGTCATCGGACATGTTTAAAGGGCAACGTCAAATGGTTTCTTACGAAGAGCTTCGTTCAGCAACAGGGAATTTTGATGAGACAAATCTGATCGGAAGTGGGAGCTTTGGATCTGTCTACAAAGGAATTCTGAGAGAAGGAATGGCAATTGCAGTAAAAGTTCTGGACCTCGGACAAACAGGAGCTTCCAAGAGCTTTTTAGCTGAATGCGAGGCTTTGAGGAACGCACGACATCGGAATCTGGTTAAACTGATAACCTCGTGCTCAAGTGTTGATTTTGGGAACGTGGATTTTTGTGCTTTGGTTTATGAATTCATGGGTAATGGGAGTTTGGATGATTGGGGACGAGGAAGAAGAAGGCACAATGCAAGTGGAGATGGGTTGAATGTTGTGGAGAGGTTGAACGTGGCCATTGATGTTGCAAGTGCCATTGACTACCTGCACCACGACTCCGAAGCTACAGTGGTGCACTGTGACCTTAAGCCAAGCAACATACTGTTGGACGAGGACATGACTGCAAAGGTAGGAGACTTCGGGCTGGCAAGGCTGCTGGTTGAGAGAGACGGTGATCATCAACAATCTTCTACCACCAATACATATGGCCTCAAGGGTTCTATTGGATATATACCTCCAGAATACGGGTTGGGTGGGAAACCATCAACAAGAGGAGATGTTTACAGCTACGGTATCATGTTGCTAGAGCTCTTCACAGGGAGGAGCCCAATCCATGAAGCTTTTACAGGGGGCGTAAGCATAGCCAAGTGGGTGAAATCGGCATTTCCCGACAAGATTACCAAAGTCTTGGATCCCAACCTACTACTACTAATGGATAATGTCCATCATGAAGGCAGATCGATAAGTCCGGAAATTCAACAAGAATGCTTGGTATCAATAATTGGGGTTGGGCTATGTTGCGCAATTGAATCTCCTGAAGCACGCATTAGCATGAGAGATGTTCTGCAGAAGCTGAAGAGTATTAGAGACTCTCTCCTAAAACCACCCATGTCAAGATCAAAAATGAATGATACCCAACATGGCAGCTCAAATGGTTAG 3090 0.4437 MAFLVVFSLSVLALLLSSQTTPFLLVDSAALNTLTDKEALLSFKTSLIADPSNSLSTWNQNFTLCNWTGVVCNENSSQRVVGLDLRGLGLSGTVSPHLANLSFLRSLQLQNNQFSGTLPDRIGDLSRLRVLNISSNRIQGEIPRNISRCSELVVLDLMANEILGVIPTDLDRLSKLQVLKLSRNKLSGAIPPSIGNLSSLTTLDLATNSLGGTIPSDLGRLRNLKTLELSINNLTGIVPPSIYNISSLVFIALASNRLWGEIPSDVGDTLPNLLDFNFCINQFTGGFPGSLHNLTKIQGIRMARNFLVGSLPPGLGNLPDLRLYNIGFNRFVSSGDAGLSFITSLTNSTNLDFLAFDDNLLEGVIPESIGNLSTVLTKLYMGGNRIYGNIPASIGRLRSLALLNLSHNSVSGEIPLEISQLKELQILGLAGNKLAGEIPASLGNLGKLTELELFGNELVGRIPTTFGNFQRLLSLDLSNNRLNGSIPKEIFSLSSLSILLNLSKNSLNGPLPQEVGNLENVVTVDLSYNDLFGSIPASIDNCKSLEELFMTNNFFSGHIPDSLGNVKGLETLDLSSNQLSGPIPYDLQKLQALQLLNLSYNNLEGGVPNDGLFRNLSRVDLEGNSKLCLFPSACKSNRGNGIAARIIIAISGSIALCILVALLVCISLYRRKNVAKIGVLSSDMFKGQRQMVSYEELRSATGNFDETNLIGSGSFGSVYKGILREGMAIAVKVLDLGQTGASKSFLAECEALRNARHRNLVKLITSCSSVDFGNVDFCALVYEFMGNGSLDDWGRGRRRHNASGDGLNVVERLNVAIDVASAIDYLHHDSEATVVHCDLKPSNILLDEDMTAKVGDFGLARLLVERDGDHQQSSTTNTYGLKGSIGYIPPEYGLGGKPSTRGDVYSYGIMLLELFTGRSPIHEAFTGGVSIAKWVKSAFPDKITKVLDPNLLLLMDNVHHEGRSISPEIQQECLVSIIGVGLCCAIESPEARISMRDVLQKLKSIRDSLLKPPMSRSKMNDTQHGSSNG* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00010 1029 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 270 1002 - -
Eupl13g00010 1029 SMART serkin_6 704 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00010 1029 MobiDBLite consensus disorder prediction 1010 1029 - -
Eupl13g00010 1029 SMART LRR_typ_2 101 124 IPR003591 -
Eupl13g00010 1029 SMART LRR_typ_2 397 421 IPR003591 -
Eupl13g00010 1029 SMART LRR_typ_2 590 615 IPR003591 -
Eupl13g00010 1029 SMART LRR_typ_2 469 493 IPR003591 -
Eupl13g00010 1029 SMART LRR_typ_2 566 589 IPR003591 -
Eupl13g00010 1029 SMART LRR_typ_2 125 149 IPR003591 -
Eupl13g00010 1029 SMART LRR_typ_2 173 196 IPR003591 -
Eupl13g00010 1029 SMART LRR_typ_2 197 221 IPR003591 -
Eupl13g00010 1029 SMART LRR_typ_2 445 468 IPR003591 -
Eupl13g00010 1029 Pfam Protein kinase domain 706 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00010 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Eupl13g00010 1029 SUPERFAMILY Protein kinase-like (PK-like) 682 1002 IPR011009 -
Eupl13g00010 1029 PRINTS Leucine-rich repeat signature 472 485 - -
Eupl13g00010 1029 PRINTS Leucine-rich repeat signature 566 579 - -
Eupl13g00010 1029 CDD STKc_IRAK 710 1005 - -
Eupl13g00010 1029 SUPERFAMILY L domain-like 374 631 - -
Eupl13g00010 1029 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 196 265 - -
Eupl13g00010 1029 Gene3D Ribonuclease Inhibitor 192 337 IPR032675 -
Eupl13g00010 1029 FunFam Leucine-rich repeat receptor-like protein kinase 33 192 - -
Eupl13g00010 1029 Gene3D Ribonuclease Inhibitor 33 191 IPR032675 -
Eupl13g00010 1029 Gene3D Transferase(Phosphotransferase) domain 1 785 1023 - -
Eupl13g00010 1029 FunFam LRR receptor-like serine/threonine-protein kinase EFR 337 637 - -
Eupl13g00010 1029 FunFam LRR receptor-like serine/threonine-protein kinase EFR 676 784 - -
Eupl13g00010 1029 Gene3D Ribonuclease Inhibitor 338 638 IPR032675 -
Eupl13g00010 1029 MobiDBLite consensus disorder prediction 1015 1029 - -
Eupl13g00010 1029 ProSitePatterns Protein kinases ATP-binding region signature. 710 732 IPR017441 GO:0005524
Eupl13g00010 1029 SUPERFAMILY L domain-like 34 331 - -
Eupl13g00010 1029 ProSiteProfiles Protein kinase domain profile. 704 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00010 1029 Pfam Leucine Rich Repeat 127 149 IPR001611 GO:0005515
Eupl13g00010 1029 Pfam Leucine rich repeat 544 603 IPR001611 GO:0005515
Eupl13g00010 1029 Pfam Leucine rich repeat 151 210 IPR001611 GO:0005515
Eupl13g00010 1029 Gene3D Phosphorylase Kinase; domain 1 685 784 - -
Eupl13g00010 1029 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Eupl13g00010 1029 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 785 1014 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00010 Eupl-Chr13 312633 316936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00010 24 1011 Receptor kinase-like Gene Family AT3G47570 42.602 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Eupl13g00010 Pkinase 6.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00010 - - vvi:100259050 1237.63