Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00005 ATGTCTCCCCAACAGCACCAACACCAGCAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAGGCAGATAGCTTATTAGCCACTCGATCTCCCGTATCAGAAGAAGATGAAGAAACCGCTTACGAATCAAGCGAGAAGGTCTTGATCGTCGGAGTAGACGAGGACGAGAGCCTCGATTCCGAAACTCCACTCTTCTCATGGAAGAAACTGTGGTTGTTTACGGGTCCCGGGTTCTTGATGAGCATTGCTTTTCTCGATCCTGGCAACCTCGAAGGCGATCTCCAGTCCGGGGCGGTCGCCGGGTATTCGCTCTTGTGGCTGTTGATGTGGGCAACCATTATGGGGCTTTTGATCCAGTTGTTGTCGGCGAGGCTCGGTGTCGCTACGGGGAGGCACCTGGCGGAGCTCTGTAGGGAGGAATATCCGAGTTGGGCCAGCTTCTTGTTGTGGTTTATGGCTGAGTTGGCTTTGATTGGGGCTGATATTCAGGAGGTTATTGGGAGTGCCATTGCGATCAAGATTCTGAGTCATGGGGTTTTGCCGCTTTGGGCTGGGGTTCTTATCACTGCATTTGATTGTTTCATATTTTTATTTCTTGAGAACTATGGGGTGAGGAAATTGGAAGCTGTTTTTGCTGTTCTCATTGCCACGATGGGACTATCGTTTGCTTGGATGTTTGCCGAGACCAAACCCAGTGGCAAGGAACTTCTAATAGGTGTTTTGATTCCAAAACTAAGCTCGAAAACTATACGGCAAGCTGTGGGAGTTGTGGGTTGTGTTATTATGCCTCACAATGTATTCTTGCATTCTGCTCTTGTACAGTCAAGGAAAATCGACACCCATAAGAAAGGTCGGGTCCAAGAGGCACTCAATTACTATTCCATTGAATCCACTGTTGCCCTTCTAATCTCCTTCATGATCAATCTGTTCGTGACAACTGTTTTTGCAAAGGGGTTTTATGGTACAGCACAAGCCGATAGTATAGGCTTAGTAAATGCAGGCCAGTATCTTCAAGAGAAGTACGGGGGAGGTCTGCTCCCAATCCTCTATATATGGGGTATTGGGTTATTAGCAGCCGGACAGAGTAGTACCATCACCGGCACCTATGCTGGGCAGTTTATCATGGGAGGTTTTCTCAATCTTCGTCTGCAGAAATGGCTGAGGGCATTGATCACTAGAAGTTTCGCAATCATCCCGACTATAATTGTTGCTCTTGTTTTTGACACCTCTGAAGCTACGTTGGATGTTCTAAATGAGTGGCTTAATGTGCTTCAGTCAGTTCAAATCCCTTTTGCACTTATTCCCCTTCTTTTCTTGGTTTCCAAGGAGCAGGTCATGGGTGACTTTAAGATCGGCCCTACACTCCAGATTGTGGCATGGATTGTGGCTTCCCTAGTGATAGTGATCAATGGGTATCTTTTGCTGGATTTCATCTCTTCTGAAGTGAACGGACTGTTGTTTGGTTCCGTGGTATGTGCTGCTACAGCAGCGTACGTGGCGTTTATTATTTATCTTGTTTCACGGGATAATGCCCTTTCCACGTGGCTCAGCGCAGTGCGCCTAAAGGGGTTCACAATCATCGGTAACTGA 1617 0.4675 MSPQQHQHQQQEEEEEEEEEEEEEEKEEEEADSLLATRSPVSEEDEETAYESSEKVLIVGVDEDESLDSETPLFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAVAGYSLLWLLMWATIMGLLIQLLSARLGVATGRHLAELCREEYPSWASFLLWFMAELALIGADIQEVIGSAIAIKILSHGVLPLWAGVLITAFDCFIFLFLENYGVRKLEAVFAVLIATMGLSFAWMFAETKPSGKELLIGVLIPKLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDTHKKGRVQEALNYYSIESTVALLISFMINLFVTTVFAKGFYGTAQADSIGLVNAGQYLQEKYGGGLLPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLQKWLRALITRSFAIIPTIIVALVFDTSEATLDVLNEWLNVLQSVQIPFALIPLLFLVSKEQVMGDFKIGPTLQIVAWIVASLVIVINGYLLLDFISSEVNGLLFGSVVCAATAAYVAFIIYLVSRDNALSTWLSAVRLKGFTIIGN* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00005 538 Hamap Divalent metal cation transporter MntH [mntH]. 65 487 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl13g00005 538 Coils Coil 4 37 - -
Eupl13g00005 538 MobiDBLite consensus disorder prediction 31 45 - -
Eupl13g00005 538 MobiDBLite consensus disorder prediction 12 30 - -
Eupl13g00005 538 PRINTS Natural resistance-associated macrophage protein signature 158 184 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl13g00005 538 PRINTS Natural resistance-associated macrophage protein signature 431 450 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl13g00005 538 PRINTS Natural resistance-associated macrophage protein signature 369 388 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl13g00005 538 PRINTS Natural resistance-associated macrophage protein signature 188 207 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl13g00005 538 PRINTS Natural resistance-associated macrophage protein signature 397 414 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl13g00005 538 PRINTS Natural resistance-associated macrophage protein signature 262 285 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl13g00005 538 PRINTS Natural resistance-associated macrophage protein signature 213 234 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl13g00005 538 MobiDBLite consensus disorder prediction 1 55 - -
Eupl13g00005 538 NCBIfam Nramp family divalent metal transporter 84 453 - -
Eupl13g00005 538 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 77 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl13g00005 538 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 18 516 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl13g00005 538 Pfam Natural resistance-associated macrophage protein 100 461 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00005 Eupl-Chr13 239246 255736 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00005 15 519 Inorganic Solute Cotransporters AT1G47240 77.515 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00005 K21398 - nnu:104611676 856.284