Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01401 ATGTCGAAATTACCAAAATTACCCTTTCCTTCGCTTCTTCTTCTTCTCTTCGTTGTCGTAATTTTTAGGGCAGCCCTAGCTTTGCAGGACATTTCCTCTGATAAATTGGCTCTCCTTCACTTCAAATCCTCTGTTACCGAAGACCCTTTAAGCTTCTTCTCTAACTGGAACTCTAACGAGGAGGACCCTTGTTCTTGGAGGGGCGTTACTTGTGACGGCCGTTCTCGTAGGGTTACGGCGCTCCAGCTCTCTGGCAACCTTACTTGCTCCGTTTCCGTTACGTCAGGTAACTCCAACCCTAATTTATTTCCGTGCTACTTAGGGTTTCTTTCTCTAGGCTTCGATTCATCTGAAAAGAACAGTCCTAATTTGAAAGGGAAGTTGTCACCCAGCATCGGTGATCTCACCCAACTTAGGGTTTTGTCGTTGGGGTTTAATGGTTTCTTTGGTGAGGTGCCTCAGGAGGTTGGGAATCTTCGTTTTTTAGAGATTCTTGACCTTGGATTTAACGGCTTTGAAGGAGCGATACCGGCATCCATTGCTAACTGCATTGAATTACGGGAGGTTGCTTTTGCCGGGAATCAGTTGAATGGAACTATTCCAGTGTTCTTCGCTGGGTTTAGGAATCTGCGCTTCCTTTCGTTGTCTTTTAACATGTTGCAGGGTCCTGTTCTGGAGGAATTTGGGGAGAATTGTGGGGTTCTTGAACATCTGCATCTTGCTGGGAATTATCTTTCGGGCTCAATTCCTTCAAATTTAGGGAATTGCAGTAGGCTTCGTTCATTGATATTGTCTTCCAATATGTTGGAAAATGGGATTCCTTCGAATATTGGGAAGCTTCGGTTGCTTGAAGCCCTCGACTTGTCGAGGAATTATCTAAGTGGGGTTATACCGACTGAGTTGGGAAACTGTAAGCAGTTGAAATTGCTTGTTCTAAAGAATGTTTTTGGCCCTCAGTTATCTAGACACGATTCGAGTTCAGGCCTTACTGGGGAGGATTTCAATTATTTTGAGGGTGAGATACCTGATAGTGTTGTAAGCCTTCCCAAACTTCGAGTGCTTTGGGCACCCAATGTGAATCTGGAGGGCAGTTTCCCACAGAACTGGGGCTCTTGCCCTGACTTGCAGGTGTTGAATTTAGCTCTGAATTACTTCACTGGTGAAATCCCTGCCTCACTCGGCAAATGCAAGAACTTGTATTTTCTTGATTTGAGCTCCAATAACTTGACTGGGAGGCTTCCTGAAGAAATTCCTGTTTCGTGTATGACAATCTTCAACGTTAGTGGAAATTCATTGTTTGGAGATATTCCAAGGTTTTCTCGAAATGGGTGTCGTGAAGTTCAAATGACCCTGTCACAATTTCAAGTGGACTTGCCTGGTTTATATTCCTCTTTCTTCTATTCTACTGCCCTTGTGAGCGTTTCTTCTTTTTCCTCTTCTTCTTCTTCTTCTTCCAAAAATCACGCTATATTGCATGATTTTAGCAAGAATCATTTCACAGGTCCTCTTCCACCAATGCCTATTGTGTCAGAGTGGTTGGCTGCCAGTCCATTGTATGGTTTCTTGTTAGGTGGTAATAATCTCGAGGGAAACATGTCAGTCCACTCATTTGATCTGTGCATGAGTTTTGATAGCCTGATCATTGACATCAGCAACAACAAAATCACCGGTGAACTTCCTTCAGAGATGGGCAGCCGTTGTAAATGCTTGAAACATTTGGACTTGGCGGGGAACGCACTTCTTGGATTGATTCCTCCAAGTTTCACTTACTTGAATTCTCTGGTTAACCTTAATCTCAGTAGAAACAAGCTGCATGGTCCAATACCATCCTATTTTAGCCAGATGAAGGATTTGAGGTATCTTTCCCTGTCAGGGAATAATTTTACCGGTAAGATTCCACAAGAATTAGCTCAATTGACTTCATTGGAGGTTCTCGAACTTTCTTCAAATTCCCTCTCAGGGGAGATACCGTCTGATTTTGCTAAACTGGGGCATCTTACTGTTCTACAACTTGATCACAACAATCTCTCTGGGCAGATTCCCGCCAGTTTCAGTAACATTAGCTCCCTTTCAGTATTCAATGTCTCTTTCAACAATTTATCTGGACCGGTTCCACTGAATTCTAATTGGATAAAATGTGAAGAGGTGCAAGGAAACCCTGATCTTCAACCGTGTCGTGCTAACCCATCATCTGCATGGGAGCAGCAGCGCTCAGGCAATGTTTCCCCGCCTGAAGCAGATTCTCCTGTTGGAAGCATACTTCGGAAAGGAAACGGGTTCAATCCTATAGAGATTGCATCAATCACATCAGCCTCTATCATAGTTTCTGTCCTCATAGCCTTAGTTTTCCTCCTTGTGTGCATGAGGAAATGCATCCCAAAATCTGCCTCGGGTCAGGGACCAGGAAAGAAAGAGGTAGTAACCTGCAATGGCATTGGTGTCCAGCTGACCTATGAGAATGTTGTAAGGGCTACTGGGAGCTTCAATGTTCAAAACTGCATCGGCAGCGGAGGTTTTGGAGCCACATACAAGGCTGAGATCATTCCTGGTGTGGTAGTGGCAGTGAAGCGACTCTCAGTTGGGAGGTTTCAAGGGGTCCAACAGTTTGCTGCTGAGATCAGAACCCTTGGAAGAGTGCAGCACATGAACCTCGTGACATTGATAGGCTACCATGTTAGTGAGTCGGAGATGTTCCTGATTTACAACTACTTGCCCGGGGGCAATCTTGAAAGGTTCATTCAGGACCGCTCAAAGAGGAATGTCGAATGGAGCATGCTCCATAAGATTGCTCTGGATATTGCACGGGCCCTTGCTTATCTGCACGACGAATGTGTCCCTCGTGTGCTGCACCGAGACATCAAACCCAGCAATATATTGCTGGACAATAACTTCAATGCCTATCTCTCTGATTTTGGCCTTGCCAGGCTTTTGGGTACTTCAGAGACACATGCAACTACTGATGTGGCAGGGACTTTTGGATATGTTGCTCCTGAATATGCAATGACATGCCGTGTTTCTGATAAGGCAGATGTGTATAGCTATGGTGTCGTTCTTCTGGAATTGATTTCGGACAAGAAGGCCTTGGATCCCTCCTTTTCTTGTTTTGGAAATGGCTTTAACATCGTGGCTTGGGCCTGCCTGCTTCTCCGGCAAGGGCGGGCCCGTGAGTTCTTCACTGCAGGGCTGTGGGATTCTGGCCCCCATGACGATCTAATCGAGACACTTCACTTGGCTGTCATGTGTACAGTTGAATCCCTATCCACCAGGCCTTCTATGAAGCAAGTTGCCCAGCGATTGAAGCGGATTCAGCCTCCAACATGTTAG 3324 0.4534 MSKLPKLPFPSLLLLLFVVVIFRAALALQDISSDKLALLHFKSSVTEDPLSFFSNWNSNEEDPCSWRGVTCDGRSRRVTALQLSGNLTCSVSVTSGNSNPNLFPCYLGFLSLGFDSSEKNSPNLKGKLSPSIGDLTQLRVLSLGFNGFFGEVPQEVGNLRFLEILDLGFNGFEGAIPASIANCIELREVAFAGNQLNGTIPVFFAGFRNLRFLSLSFNMLQGPVLEEFGENCGVLEHLHLAGNYLSGSIPSNLGNCSRLRSLILSSNMLENGIPSNIGKLRLLEALDLSRNYLSGVIPTELGNCKQLKLLVLKNVFGPQLSRHDSSSGLTGEDFNYFEGEIPDSVVSLPKLRVLWAPNVNLEGSFPQNWGSCPDLQVLNLALNYFTGEIPASLGKCKNLYFLDLSSNNLTGRLPEEIPVSCMTIFNVSGNSLFGDIPRFSRNGCREVQMTLSQFQVDLPGLYSSFFYSTALVSVSSFSSSSSSSSKNHAILHDFSKNHFTGPLPPMPIVSEWLAASPLYGFLLGGNNLEGNMSVHSFDLCMSFDSLIIDISNNKITGELPSEMGSRCKCLKHLDLAGNALLGLIPPSFTYLNSLVNLNLSRNKLHGPIPSYFSQMKDLRYLSLSGNNFTGKIPQELAQLTSLEVLELSSNSLSGEIPSDFAKLGHLTVLQLDHNNLSGQIPASFSNISSLSVFNVSFNNLSGPVPLNSNWIKCEEVQGNPDLQPCRANPSSAWEQQRSGNVSPPEADSPVGSILRKGNGFNPIEIASITSASIIVSVLIALVFLLVCMRKCIPKSASGQGPGKKEVVTCNGIGVQLTYENVVRATGSFNVQNCIGSGGFGATYKAEIIPGVVVAVKRLSVGRFQGVQQFAAEIRTLGRVQHMNLVTLIGYHVSESEMFLIYNYLPGGNLERFIQDRSKRNVEWSMLHKIALDIARALAYLHDECVPRVLHRDIKPSNILLDNNFNAYLSDFGLARLLGTSETHATTDVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELISDKKALDPSFSCFGNGFNIVAWACLLLRQGRAREFFTAGLWDSGPHDDLIETLHLAVMCTVESLSTRPSMKQVAQRLKRIQPPTC* 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01401 1107 Gene3D Ribonuclease Inhibitor 233 319 IPR032675 -
Eupl12g01401 1107 Gene3D Ribonuclease Inhibitor 463 723 IPR032675 -
Eupl12g01401 1107 SUPERFAMILY RNI-like 123 438 - -
Eupl12g01401 1107 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Eupl12g01401 1107 ProSitePatterns Protein kinases ATP-binding region signature. 834 856 IPR017441 GO:0005524
Eupl12g01401 1107 PRINTS Leucine-rich repeat signature 283 296 - -
Eupl12g01401 1107 PRINTS Leucine-rich repeat signature 639 652 - -
Eupl12g01401 1107 Pfam Protein kinase domain 829 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g01401 1107 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 333 413 - -
Eupl12g01401 1107 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 227 317 - -
Eupl12g01401 1107 SUPERFAMILY Protein kinase-like (PK-like) 812 1099 IPR011009 -
Eupl12g01401 1107 Gene3D Phosphorylase Kinase; domain 1 796 903 - -
Eupl12g01401 1107 ProSiteProfiles Protein kinase domain profile. 828 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g01401 1107 Pfam Leucine rich repeat 597 652 IPR001611 GO:0005515
Eupl12g01401 1107 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 792 903 - -
Eupl12g01401 1107 Gene3D Ribonuclease Inhibitor 31 232 IPR032675 -
Eupl12g01401 1107 SUPERFAMILY L domain-like 335 725 - -
Eupl12g01401 1107 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 336 1099 - -
Eupl12g01401 1107 Gene3D Ribonuclease Inhibitor 320 453 IPR032675 -
Eupl12g01401 1107 MobiDBLite consensus disorder prediction 726 748 - -
Eupl12g01401 1107 ProSitePatterns Serine/Threonine protein kinases active-site signature. 948 960 IPR008271 GO:0004672|GO:0006468
Eupl12g01401 1107 SMART LRR_typ_2 639 662 IPR003591 -
Eupl12g01401 1107 SMART LRR_typ_2 135 159 IPR003591 -
Eupl12g01401 1107 SMART LRR_typ_2 591 615 IPR003591 -
Eupl12g01401 1107 SMART LRR_typ_2 663 686 IPR003591 -
Eupl12g01401 1107 SMART LRR_typ_2 232 256 IPR003591 -
Eupl12g01401 1107 SMART LRR_typ_2 280 304 IPR003591 -
Eupl12g01401 1107 CDD STKc_IRAK 834 1102 - -
Eupl12g01401 1107 Pfam Leucine Rich Repeat 570 589 IPR001611 GO:0005515
Eupl12g01401 1107 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 904 1107 - -
Eupl12g01401 1107 MobiDBLite consensus disorder prediction 726 745 - -
Eupl12g01401 1107 Gene3D Transferase(Phosphotransferase) domain 1 904 1105 - -
Eupl12g01401 1107 SMART serkin_6 828 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g01401 1107 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 487 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01401 Eupl-Chr12 30574126 30577939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01401 11 1107 Receptor kinase-like Gene Family AT3G02130 53.166 0.0 1032
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Eupl12g01401 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01401 - - msin:131231089 1478