Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01387 ATGGGAAACAGCACTTCCCGTGTTGTGGGGTGCTTTGTGCCCCTGGGTAATGGAAAAGGTGGGGTCGATTTGGAGTTCTTGGAGCCACTGGACGAAGGATTAGGTCATTCCTTCTGTTATGTTAGGCCAGTGATTCTTGACTCTCCCGCTATAACCCCATCAAACTCTGAGAGGTTCACAGTTGATTCGAGCACGCTCGATTCTGAAACACTGAGCGGGTCATTCAGACGTGAAATCATAGAAGATATGTCCGGTTTACAGAGACCCAACAAGAGTTTCCCTGAAACTACGTTCAAAACCATCTCGGGGGCTTCAGTCAGTGCCAATGCCTCTACAGCTCGAACTGGAAACCAGAGTGCATATTTTGTGAGTGACACACAGGAGCCTGCTGCGTCATTCGAGAGCACTTCCTCATTTGCTGCAATACCTCTCCAGCCATTGCCTCGTGGGTCTGGACCTTTGAATGGGTTCATGTCGGGTCCTCTGGAGAGAGGATTTGCTTCTGGCCCTTTGGAAAGGGGAGGTGGGTCTATGTCCGGGCCGATGGAAAAGGGGGCCTTCATGTCAGGTCCTTTGGATGGTACAGATAAAATAAACTTCTCAGCTCCGCTCACATATAGTCGCAGAAGACCAGGTCTCAGGCGTCTGGTGAGGAGAGTGAGTGGACCCATGAAAAGTGCCCTCACTCGGACCTTCTCGAGACATTCGATGGGGTCTGGTTGGATGCAACGGTTTTTCTTGCACCCAGTGACTCAGTTTGTCTGGCATTCTAAGGAACCAAAGTTCCGTCCAGAAGCCCCACAAAACTCTCTTGAAGTGGGCCCATCTGAAGTGGAGTATAGGAATACCCGCAACTTGCAATGGGCTCACGGAAAGGCTGGTGAAGACAGGGTTCATGTCGTGCTGTCTGAAGAACAGGGATGGTTGTTTGTTGGGATATATGATGGCTTTAGTGGCCCCGATGCACCTGATTTTCTAATGAGCCATCTTTATAGGGCTATAGATAAGGAATTGGAAGGATTGCTTTGGGATTATGAGGATATATCTGTAAATGATCCCCCAAAATCCGAGCTTCTTGAGAATAAAAATGTTGGGGTGTCTTCAGAGTGCAGAGAAGAAGACCTTCAAAATCCTCAACCGAGTGAAGGGGTTGCCTGTGATGATATAGAAGAACCACTTGATTCAGGATCCGAGACAGCTCAAGTATCTCATCACGAGATAGTTGAGGATGAAGTTAGGGAGAGGACTGAATTGCAGGCAGCTATTGAAAACATTGAAGAGCCAAGCACAAATCCCAGCACTTCAGGCACAGAAGTTTTTTCTACTCCCACTGTGAACTTGGCTGGCCAAGGAAGGAAGAGCAAGCGGCTGTATGAACTTCTTCAGCTGGAACACTGGGATGTTCAAGGTTCTTCCTCGTTGTCAGAAATTGGAAACCAAAGGAAGGGCTCGTGGGATTTGCAGCCAAATTCAATTGGCTTTTGTTCCAGAGGAACCTTACCAGAAGCACAACTTATGTCATACTCGGTGAACCCCAAAGGAGACTGTTCTAGCTATCAGGTTGAAGATGCTAGCGCTATGCAAGAAGATGGAGGTGCTGTTGGGATGAAATCTAAACAAGTTACAATGTCTTTTACTGTTTCGGGGCAACGGCAGAGTACAACTAGGTCTCTGATTGGGTCAAAGATTAGAAAAATGTACAGAAAGCAGAAATCCTTGCGTAAAAAACTGTTCCCTTGGAGTTATGACTGGCACAGAGAAGAAACCCATGTTGATGAGAGGATAGTGGAGCCACTGGGACCAATGAGGAGATGCAAGTCAGGACAGGTCAATCATGATGCAGTCTTGAGAGCGATGGCTCGAGCACTTGAAACCACTGAGGAGGCTTACATGGAAATGGTTGAGAAGGCACTTGACAGAAACCCAGAGCTTGCCTTGATGGGCTCTTGTGTTCTAGTGATGTTAATGAAGGATCAGGATGTGTATGTCATGAACGTTGGCGATAGCCGTGTGATCTTGGCACAAGAGAGGCTGAATGATCGCCACCTGAATCCCAATCTTGTGAAGGATGATGTGAGGCACCGGAACAGGTCTAGGGAGTCACTTGTACGTGTGGAGCTGGACAGAATATCAGAGGAGTCCCCAATGCATAATCAGAACAGCCGGATTAACCAGATCAACAAGAACCGAGAAATTTCTATTTGCAGATTAAAGATGAGGGCCGTTCAGCTTTCCAATGATCACAGCACAAGTGTTGAGGAGGAAGTTTTGAGGATTAAAGCGGAACATGTTGATGATAACCAAGCTATCTTGAATTTTAGAGTGAAGGGGCAGTTGAAAGTCACAAGAGCATTTGGTGCTGGGTTTCTTAAGAAGCCTAGATGCAACGAAGCTTTATTGGAGATGTTTCGGATTGACTACGTGGGGACTGCCCCTTATATCAGCTGCACCCCCTCCATCCTTCACCACCGACTTTGCTCAAGTGACCGCTTCTTGGTCCTTTCCTCTGATGGGCTTTATCAGTACTTCAGCAACGAAGAGGTCGTTTCACATGTAGAATGGTTCATGGAGAATGTCCCTGAAGGTGATCCTGCACAGTACCTGATAGCAGAGCTTCTCTTTCGTGCCGCCAAAAAAAATGGGATGGATTTTCATGAGTTGCTTGATATTCCTCATGGCGATCGCCGGAAATACCACGATGATGTTTCAGTTATGGTGGTATCCCTGGAGGGAAGGATTTGGAGATCATCTGGCTGA 2757 0.4733 MGNSTSRVVGCFVPLGNGKGGVDLEFLEPLDEGLGHSFCYVRPVILDSPAITPSNSERFTVDSSTLDSETLSGSFRREIIEDMSGLQRPNKSFPETTFKTISGASVSANASTARTGNQSAYFVSDTQEPAASFESTSSFAAIPLQPLPRGSGPLNGFMSGPLERGFASGPLERGGGSMSGPMEKGAFMSGPLDGTDKINFSAPLTYSRRRPGLRRLVRRVSGPMKSALTRTFSRHSMGSGWMQRFFLHPVTQFVWHSKEPKFRPEAPQNSLEVGPSEVEYRNTRNLQWAHGKAGEDRVHVVLSEEQGWLFVGIYDGFSGPDAPDFLMSHLYRAIDKELEGLLWDYEDISVNDPPKSELLENKNVGVSSECREEDLQNPQPSEGVACDDIEEPLDSGSETAQVSHHEIVEDEVRERTELQAAIENIEEPSTNPSTSGTEVFSTPTVNLAGQGRKSKRLYELLQLEHWDVQGSSSLSEIGNQRKGSWDLQPNSIGFCSRGTLPEAQLMSYSVNPKGDCSSYQVEDASAMQEDGGAVGMKSKQVTMSFTVSGQRQSTTRSLIGSKIRKMYRKQKSLRKKLFPWSYDWHREETHVDERIVEPLGPMRRCKSGQVNHDAVLRAMARALETTEEAYMEMVEKALDRNPELALMGSCVLVMLMKDQDVYVMNVGDSRVILAQERLNDRHLNPNLVKDDVRHRNRSRESLVRVELDRISEESPMHNQNSRINQINKNREISICRLKMRAVQLSNDHSTSVEEEVLRIKAEHVDDNQAILNFRVKGQLKVTRAFGAGFLKKPRCNEALLEMFRIDYVGTAPYISCTPSILHHRLCSSDRFLVLSSDGLYQYFSNEEVVSHVEWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01387 918 SUPERFAMILY PP2C-like 292 910 IPR036457 -
Eupl12g01387 918 Gene3D - 550 915 IPR036457 -
Eupl12g01387 918 ProSiteProfiles PPM-type phosphatase domain profile. 279 909 IPR001932 -
Eupl12g01387 918 SMART PP2C_4 279 907 IPR001932 -
Eupl12g01387 918 Gene3D - 259 442 IPR036457 -
Eupl12g01387 918 PANTHER PROTEIN PHOSPHATASE 2C 278 908 IPR015655 GO:0004722|GO:0006470
Eupl12g01387 918 Pfam Protein phosphatase 2C 631 724 IPR001932 -
Eupl12g01387 918 Pfam Protein phosphatase 2C 734 880 IPR001932 -
Eupl12g01387 918 CDD PP2Cc 609 909 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01387 Eupl-Chr12 30474067 30484516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01387 1 918 PP2C-type Phosphatase Gene Family AT2G46920 63.538 0.0 1103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01387 - - nnu:104590613 1429.85