Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g01382 ATGTCACTTCCCGAGGGTAATCCGTCATCGAGCTACGACCAGAGCTCTTCATGGAGGAATTCATTTCCTCTGAACAGAGAGAAGCGCGAAGTAGATGAGAGTGATGAAGATCTGTTCACTGTTCCTGACTTGGAAGCTCCACCGAGTGAGTCGGCGAGGGCGACCGAGGTTCAGCAGGGCAATAGCAGTAGTGGAGTTGCTGGAAAGCGTCGGAGGGGACGGAATCCGGCAGACAGGGAGTACAGAAAGCTGAAGAGGTTGCTGAGGAACAGAGTCTCCGCCCAACAAGCCCGAGAAAGAAAGAAAGTTTATGTCAACGATCTGGAATCAAAGGCCAACGAGTTGCAGGACAGGAACTCAAAATTAGAGGAGAAGATTTCAACTCTGAATAATGAGAACACAATGCTTCGGAAGGTCCTTATGAACACAAGGCCTAAAGTTGATGAGAGTATCGAGCCAAAACATGATCAGTCTGGCAAGAGCTGA 486 0.4918 MSLPEGNPSSSYDQSSSWRNSFPLNREKREVDESDEDLFTVPDLEAPPSESARATEVQQGNSSSGVAGKRRRGRNPADREYRKLKRLLRNRVSAQQARERKKVYVNDLESKANELQDRNSKLEEKISTLNNENTMLRKVLMNTRPKVDESIEPKHDQSGKS* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g01382 161 Coils Coil 94 139 - -
Eupl12g01382 161 Gene3D Single helix bin 101 142 - -
Eupl12g01382 161 MobiDBLite consensus disorder prediction 1 84 - -
Eupl12g01382 161 MobiDBLite consensus disorder prediction 1 22 - -
Eupl12g01382 161 Pfam bZIP transcription factor 79 138 IPR004827 GO:0003700|GO:0006355
Eupl12g01382 161 SUPERFAMILY Leucine zipper domain 81 141 IPR046347 GO:0003700|GO:0006355
Eupl12g01382 161 CDD bZIP_HY5-like 83 133 - -
Eupl12g01382 161 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 143 IPR004827 GO:0003700|GO:0006355
Eupl12g01382 161 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Eupl12g01382 161 MobiDBLite consensus disorder prediction 52 68 - -
Eupl12g01382 161 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 4 161 IPR044280 GO:0000981|GO:0045944
Eupl12g01382 161 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g01382 Eupl-Chr12 30402001 30415903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g01382 62 149 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 77.528 4.80e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl12g01382 bZIP_1 1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g01382 K16241 - nnu:104585584 246.899